Xanthomonas campestris pv. raphani: XCR_3743
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Entry
XCR_3743 CDS
T01872
Name
(GenBank) TonB-dependent outer membrane receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcp02000
]
XCR_3743
Transporters [BR:
xcp02000
]
Other transporters
Pores ion channels [TC:
1
]
XCR_3743
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AEL08603
LinkDB
All DBs
Position
complement(3997693..4000572)
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AA seq
959 aa
AA seq
DB search
MKRLSGSRRSCLAVQLSLCLIPSLAWAQQPEPAPTTRTLDSVQVTGTRIKTAELQGQVPI
QTLNRADIERTGLTSIGEVLQELTASGSALNAKFNSSGNFGFPPDGSGVGAGSAQVDLRH
LGSKRVLVLVDGIRWVNESSASGVGSSTDLNTIPLAIVERIEVLEDGASSLYGSDAIAGV
VNIITRRTFDGAQVTLNYGQYGKGDGTNQGMDLAWGTSGEDFSLFLGASYVKQDPIYARD
RAQARFPIPGTGLTFASSATPDGRFQFVDPNTGVRQNLTPNAGVGTPQYDGSGGCTRSDD
YHCFGTADRYNFAEQNLLLTPSERKGVFAQFRYYFNDDVQWYVKALGNRRESTNQAAPEP
IFLGPDAGTGNPLADNIVISALNPFNPFGFDLNSATNLIQIGRRPVEGGPRRYEQQVDTQ
YFGTGLVGTFEGASRTWFWDVNGMYSKNKAEQTNYGSYNLFNINLGLGDPAACAAVAGCV
PLDIFSGAGSITPEMLRWIQPVVRDRSQNELSLFTANLSSELFQLPGGAVSFATGYEYRK
YEGSYQPDPLTVAGRYNGVPSLPTSGSYDVNEAYLELNIPIFTNSTLGDKLDLNIAGRYS
DYSTFGGEFTPKYGLRWQVSDEFVLRTSYAEGFRAPTIGELFGSAARADLQLSDPCSIGL
GGTAPRGSAANCATLVVPVNYQQANQQISVTTGGNEQLEPERSRSFSAGFVFSPGFGSNA
SWSDRLDLEVTFYRHHVDGAIQAINAQTQLDLCVDTLDALYCDGIGRASTGGINAFNNRL
TNLGSIKTDGWDVDLFWTLPESALGRFKLSWQNTFVGRYEALGAAGQRQPQGPGIEVVDS
AIPEWTSNAVLDWSLGNWTASWTARHISKLTEQCGDAVEFAVCSTPAEGTNQLDAITYHD
AQVGYRFDWLKGLQLTAGLNNVFDKDPPICLSCSLNGYDASTYDIPGGRFWYVRADLKF
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtctgagtggctcccgtcggtcgtgcctggccgtgcagttgtcgttgtgtctg
atcccttcgctggcctgggcgcagcagcccgaacccgccccgactacgcgcacgctcgac
agcgtgcaagtcaccggcacccgcatcaagacggccgaattgcagggccaggtgccgatc
cagacgcttaaccgcgccgatatcgagcgcaccgggctcacctcgatcggcgaggtgttg
caggagctcactgcctccggctcggcgctcaatgccaagttcaattcgtccggcaacttc
ggctttccgcccgacggcagcggcgtgggtgccggctcggcgcaggtggacttacgccat
ctcggttccaagcgcgtgctggtgctggtggatggcatccgctgggtcaatgaatcctcc
gcctcgggcgtgggctcgtcgacggacctcaacaccattccgctggcgatcgtggagcgc
atcgaagtgctcgaagacggcgcctcgtcgctgtacggctcggatgcgatcgccggtgtg
gtcaacatcatcacgcggcgcacgttcgacggcgcgcaggtcacgctcaattacgggcaa
tacggcaagggcgatggcaccaaccagggcatggacctggcctggggcaccagtggcgag
gatttcagcctgtttctgggcgccagctacgtcaagcaggatccgatctatgcgcgcgac
cgtgcgcaggcacgcttccccattcccggcaccgggctgacctttgccagttcggccacg
cccgatgggcggttccagttcgtcgacccgaacaccggcgtgcgccagaacctcaccccc
aacgcgggcgtgggcacgccgcaatacgacggcagcggtggctgcacgcgcagcgatgat
taccactgcttcggcaccgccgaccgctacaacttcgccgagcagaacctgctgctgacg
ccgtccgagcgcaagggtgtgttcgcgcagttccgctattacttcaacgacgacgtgcag
tggtacgtcaaggcgttgggcaaccggcgcgagtccaccaaccaggccgcgcccgaaccg
atcttcctcggccccgatgccggcaccggcaatccgctggccgacaacatcgtgatttcc
gcgctcaacccgttcaacccgtttggctttgatctgaactcggccaccaacctgatccag
atcgggcggcgcccggtggaaggcggcccgcggcggtatgagcaacaagtggacacgcag
tatttcggcactggcctggtcggcaccttcgaaggcgcgtcgcggacctggttctgggac
gtcaacggcatgtacagcaagaacaaggccgagcagaccaactacggcagctacaacctg
ttcaacatcaacctggggctcggcgacccggccgcctgcgcggcggtggccggctgcgtg
ccactggatatcttcagcggcgccggcagcatcacgccggagatgttgcgctggatccag
ccagtggtgcgcgaccgcagccagaacgaactgagcctgttcaccgccaacctgagcagc
gagctgttccagttgcccggcggtgcggtgagctttgccaccggctacgagtaccgcaaa
tacgaaggctcgtatcagccggacccgctcaccgtggccggccgctacaacggcgtgccg
tcgttgcccacctccggcagctacgacgtcaatgaggcgtatctcgaactcaacatcccg
atctttaccaactccacgttgggcgacaaactcgatctgaacattgcgggccggtattcg
gattactccacgttcggcggcgagttcacgcccaagtacggcctgcgttggcaggtgagc
gacgagttcgtactgcgcaccagttacgcggaaggcttccgcgcgccgaccatcggcgag
ttgttcggttcggcggcgcgtgcggatctgcagttgtccgacccgtgttccatcggcctg
ggcgggaccgcgccgcgtggcagcgccgccaactgcgcaacgctggtggtgccggtgaac
taccagcaggccaaccagcagatttcggtgaccaccggcggcaacgagcaactggagccg
gagcgctcgcgtagcttcagcgccggcttcgtgttcagcccgggctttggcagcaacgca
agttggtccgaccgtctcgatctcgaagtgaccttctaccgtcaccatgtggatggcgcg
atccaggcgatcaacgcgcagacccagctcgatctgtgcgtggatacgctggacgcgctg
tactgcgacggcatcggccgcgcgtccaccggcggcatcaatgcgttcaacaaccgcctg
accaacctgggctcgatcaagaccgacggctgggatgtggacctgttctggaccttgccg
gaaagcgcgttgggccgcttcaagctgtcctggcagaacaccttcgtgggccgttacgag
gcgctgggcgccgccgggcagcggcagccgcaggggccgggcatcgaagtggtggatagt
gcgattcccgagtggaccagcaacgcggtgctggactggtcgctgggcaactggaccgca
tcgtggaccgcacgccacatttccaagctcaccgaacagtgcggcgacgcagtggaattt
gcagtgtgctcgacgccggccgagggcaccaatcaactggatgccatcacctatcacgat
gcgcaggtgggctaccgcttcgactggttgaagggcctgcaactgaccgccggcttgaac
aacgtgttcgacaaggatccaccgatctgcctgtcgtgctcactcaacggctatgacgcg
tctacctatgacatccccggcggccgcttctggtacgtgcgcgcggacctgaagttctag
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