KEGG   Xanthomonas campestris pv. raphani: XCR_3765
Entry
XCR_3765          CDS       T01872                                 
Symbol
xcsD
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
xcp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XCR_3765 (xcsD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xcp02044]
    XCR_3765 (xcsD)
Secretion system [BR:xcp02044]
 Type II secretion system
  General secretion pathway protein
   XCR_3765 (xcsD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 DUF6432
Other DBs
NCBI-ProteinID: AEL08625
LinkDB
Position
complement(4022847..4024919)
AA seq 690 aa
MIVVRRPWLLSATLLLALPSLTMLPLHAADAPAVRMQDVDLRAFIQDVSRATGITFIVDT
RVQGSVNVARAQAMSEADLLGMLLAVLRANGLIAVSSGPSTYRIIPDDTAAQQPGSAASG
NLGFATQVFTLQRVDARSAAEILKPLVGRGGVIMAMPQGNSLLIADYADNLRRIRGLVAQ
IDTDRAAIDTVTLRNSSAQELARTLTTLFGQAGERSAVLSVLPVESSNSLIVRGDPALVQ
RVVRTALDLDGRAERRGDVSVVRLQHASAEQLLPVLQQLVGQTPGNEAQPGQETRPTAVD
VAASAGAAQTQVIAPAAGKRPVIVRYPGSNALIINADPETQRALMDVIRQLDVHREQVLV
EAIVVEISDTAAKRLGVQLLLAGRNGTVPLLATQYSGAAPGIVPLAAAAAGTRSNNGEDD
SVLEQARNVAAQSLLGLSGGLIGLAGQSNDAVFGMIIDAVKSDTGSNLLSTPSIMTLDNE
QARILVGQEVPITTGEVLGAANDNPFRTIQRQDVGVELEVRPQINTAGGITLAIKQEVSA
IAGPVSTQSSELVFNKRQIETRVVVENGAIVALGGLLDQNDRQTVEKVPLLGDVPGLGAL
FRHKSRNRDKTNLMVFIRPTIIRDAADAQRMTAPRYNYLRDRQLADGDPEAALDALVRDY
LRAQPPQLPASAPAKPTPQPPALTAAPRTR
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgatcgtcgtccgtcgcccctggctgttgtccgccaccttgttgcttgcgctgccgtcg
ttgacgatgctgccgctgcacgccgccgatgcaccggcggtgcgcatgcaggacgtggac
ctgcgcgccttcatccaggatgtctcgcgcgccaccggcatcaccttcatcgtcgacacg
cgcgtgcagggctcggtcaacgtagcgcgtgcgcaggccatgtccgaagccgacctgctg
ggcatgctgctggcggtactgcgtgcgaatggcttgattgcggtctccagcgggccatcg
acctaccgcatcatccccgacgacaccgccgcgcagcagcccggcagcgcggccagcggc
aatctcggcttcgccacccaggtgttcacgctgcagcgcgtggatgcgcgcagcgcggcg
gaaatcctcaagccgctggtgggacgcggcggggtgatcatggcgatgccgcagggcaat
agcctgttgatcgccgactacgccgacaacctgcgccgcatccgtggcctggtggcgcag
atcgacaccgaccgcgccgccatcgacacggtgacgctgcgcaacagctcggcgcaggaa
ctggcacgcacgctcaccacgctgtttggccaggccggggagcgcagcgcggtgttgtcg
gtgttgccggtggagagcagcaattcgttgatcgtgcggggcgacccggcattggtgcag
cgcgtggtacgcaccgcactggatctggatgggcgggccgagcgccgtggcgatgtcagc
gtggtgcgcctgcagcacgccagcgccgaacaactgctgccggtgctgcagcaactggtc
gggcaaaccccgggtaacgaggcgcagcccgggcaagagacgcgccccaccgccgtggat
gtggccgcgagtgctggcgctgcgcagacgcaggtgattgcgccggccgccggcaagcgc
ccggtgatcgtgcgctaccccggttccaatgccctgatcatcaatgccgacccggaaacc
cagcgcgccttgatggacgtgatccgccagctcgatgtgcaccgcgagcaggtgctggtg
gaagcgatcgtggtggagatttccgacaccgctgccaagcgtctgggcgtgcagctgctg
ctggccgggcgcaacggcaccgtgccgttgctggccacgcagtacagcggcgcggcgccg
ggcatcgtgccgttggctgccgcggccgccggcacgcgcagcaataacggggaagacgat
tcggtactggagcaggcgcgcaacgtggccgcgcaatcgctgctcggattgagcggcggg
ctgatcggcctggccgggcaaagcaacgatgcggtgttcggcatgatcatcgatgcggtc
aagagcgacaccggctccaacctgttgtccacgccgtcgatcatgaccctggacaacgag
caggcacgcatcctggtgggccaggaagtgccgatcaccactggcgaggtgctgggcgcg
gccaacgacaatccgttccgcaccatccagcgccaggatgtgggcgtggagctggaagtg
cgcccgcagatcaataccgccggtggcatcacgttggcgatcaagcaggaagtctcggcc
attgccgggccggtgagcacgcaatcctccgagctggtgttcaacaagcgccagatcgaa
acccgcgtggtggtggaaaacggtgccatcgtcgcgctgggcggcttgctggatcagaac
gaccggcagaccgtggagaaggtgccgctgctgggcgatgtgcccgggttgggcgcgttg
ttccggcacaagtcgcgtaaccgcgacaagaccaacctgatggtgttcatccgccccacc
atcatccgcgacgccgccgatgcgcagcgcatgaccgcgccacgctacaactacctgcgc
gaccggcagctggccgatggcgacccggaagcggccctggatgcgttggtgcgcgactac
ttgcgtgcacagccgccacagctgccggcgtccgcgcccgccaagcccacgccgcagccg
ccggcactcaccgccgcgccgcgcacacgctga

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