Xanthomonas campestris pv. raphani: XCR_3797
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Entry
XCR_3797 CDS
T01872
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
XCR_3797
Enzymes [BR:
xcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
XCR_3797
Peptidoglycan biosynthesis and degradation proteins [BR:
xcp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
XCR_3797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AEL08657
LinkDB
All DBs
Position
complement(4059982..4061328)
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AA seq
448 aa
AA seq
DB search
MNSSTGPKWLIPMALMLGLAACSSAPKKTAGSAGNGAIKGVKVEGKGPAHVATGCPSTSP
YAAAKEDPSTRGDYTAGGLYKPGVKDTTPDHVPNVACIPEPLVSNEPRSAVGNRSPYEVL
GKRYVVMDNPGDYVERGTASYYGSKFHGRLTSNKEVYDMYAFTAAHKTLPLPSFALVTNT
DNGQSVVVRVNDRGPFHDGRVIDLSYAAAVKLGITGKGTGNVEVRGLTEADNANLLAKRR
SGIAPVTTVAAAKPAASSQIDSLVQQLPARGTTARPPATGTAAAPVPMGERWRYRVADSR
QPGNADNFDAWMKSQGVRVATGKPTAATPRPAAAAAVATTVAVARTPDAPPAPRPAAPVI
VAKPPTAAEAALGDILLQVASFASRENANRALSQLASAGIAGASVSDIVSGGRTLWRLRV
NARDHANASEIAQRIAGLGFGRPQIVAN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcagcacaggtcccaagtggctgatcccgatggcattgatgctcgggctggcg
gcctgtagcagtgcaccgaagaaaaccgccggcagcgccggcaatggcgcgatcaagggc
gtcaaggtagagggcaaggggccggcgcatgtcgccaccggctgcccgtccacctcgccg
tatgccgccgccaaggaagacccctccacgcggggcgactacaccgccggcggcctgtac
aagcccggcgtcaaggacaccaccccggaccacgtgcccaacgtggcctgcattcccgag
ccgctggtcagcaacgagccgcgctcggcggtgggcaatcgctcgccgtatgaagtgctg
ggcaagcgctacgtggtgatggacaaccccggcgactatgtcgaacgcggcaccgcctcg
tactacggcagcaagttccacggccggctgacctccaacaaggaggtgtacgacatgtac
gccttcaccgccgcgcacaagaccttgccgctgcccagcttcgcgctggtgaccaatacc
gacaacgggcaatcggtggtggtgcgcgtcaatgaccgcgggccgttccacgatggccgg
gtcatcgacctgagctacgccgctgcggtgaagctggggatcaccggcaagggcaccggt
aatgtcgaggtacgcggcctgaccgaagccgacaacgccaatctgctggccaagcgccgt
agcggcatcgcgccggtcaccaccgtggccgcggccaaaccggctgccagcagccagatc
gacagcctggtgcaacagctgcccgcccgcggcaccactgcccgcccgccagccaccggc
acggccgcagcgccagtgccgatgggcgagcgctggcgttaccgggtggccgattcgcgg
cagcccggtaatgccgacaatttcgatgcgtggatgaagtcgcagggcgtgcgcgtggct
acgggcaaaccgacagcggccacgccgcgcccggccgctgccgccgccgtggcaaccacg
gtggcggtggccaggacgccggatgctccgccagcgccgcgtcccgccgctccggtcatc
gttgccaagccgccgaccgccgccgaagccgcgctgggcgacatcctgttgcaggtcgcc
agcttcgccagccgcgaaaacgccaaccgcgcgctgtcgcagctggcctcggccggcatt
gccggtgccagcgtcagcgacatcgtcagtggcgggcgcaccctgtggcgcctgcgcgtg
aatgcacgtgaccacgccaatgcctcggaaatcgcgcagcgcattgccgggctgggcttt
ggccgcccgcaaatcgtggccaactga
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