Xanthomonas campestris pv. raphani: XCR_3799
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Entry
XCR_3799 CDS
T01872
Name
(GenBank) endopolygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00040
Pentose and glucuronate interconversions
xcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XCR_3799
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
XCR_3799
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-ProteinID:
AEL08659
LinkDB
All DBs
Position
complement(4062819..4064219)
Genome browser
AA seq
466 aa
AA seq
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MKLLAAAIGGLCLSLASQASAITQATGDSRAVSEPGIPATCQAVKAEHTASARQFAAALE
SAPPDTKNIQAALTACAGKNGSVLLTAGAGNAFLTGPLSIPTGVTLVVDQGVTVYGSRNP
ADYGSGCGTAGSKSGGCLPLISVKGTRSGVMGVRIGGRQGTIDGRGDLTMLGKSTTWWEF
GENAKKANQVQNSPDLIKVQNSSAFTLYNVNLINAAYFHFFAHIVDGLTIWGTRVKSPAT
SPNTDGLDLDSVVNATVFDNDVMGGDDCVAIKTIASKSGNITLRNNRCYGTHGISIGSEL
MSGVSNVLVDSTAITASDDAGNRSTDNNGLRIKTSIAKGGPVSLITYRNTCLYGVTSPLV
INPFYSSGGSGTAPTFSQIVVNGLRTTGDAGLKGKGWILEGYNAQTPLDLVLANVATGNK
AVTASNARIGLSNSELVPTGTNVTTSAVQLAGSIPTCSSAPHFPAL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctcgctgccgccatcggcggtctttgtctttcgcttgcctcacaggcgagc
gccatcacccaggcaaccggcgatagccgtgcggtctccgagcctggcattcctgcgacc
tgccaggcggtaaaggccgagcacacggctagcgcgcgccagttcgcggcggcattggaa
agtgcgccgcccgataccaagaacatccaggccgcactgaccgcgtgtgcggggaagaat
ggcagcgtgctgctgacggcgggcgcgggcaacgcgttcctgaccgggccgctgtcgatt
cctactggcgtgacgttggtggtcgatcagggcgtcaccgtgtacggctcgcgtaacccc
gccgattacggcagtggctgcggcacggccggttccaagagtggcggatgcctgccgttg
atcagcgtcaagggcaccaggtctggtgtgatgggtgtgcgcatcggtgggcgtcagggc
accatcgatggccgtggtgatctgaccatgctcggcaagagcaccacgtggtgggagttc
ggcgagaacgccaagaaggccaaccaggtgcagaacagcccggacctgatcaaggtgcag
aattccagcgcatttacgctctacaacgtcaatctgatcaatgcggcgtacttccatttc
ttcgcgcatatcgtcgatggcctgaccatctggggcacgcgggtgaagtcgccagcgacc
agccccaacaccgatggcctggacctcgatagcgtggtcaacgcaaccgtgttcgataac
gatgtgatgggcggcgacgattgcgtggcgatcaagaccatcgcctccaagtccggcaac
atcaccttgcgcaacaatcgttgctacggcacgcacggcatctcgattggcagcgagctg
atgtccggcgtcagcaatgtgttggtcgattccactgccatcaccgccagcgacgatgcc
ggcaaccgcagcaccgacaacaacggtctgcgcatcaagaccagcatcgccaagggcggc
ccggtcagtctgattacctatcgcaatacctgcctgtacggcgtcaccagcccgctggtg
atcaacccgttctattccagcggcggcagcggcaccgcgcccaccttcagccagattgtc
gtcaatggcttgcggaccaccggcgatgcgggtctcaagggcaagggctggatcctggaa
ggctataacgcgcagacaccgctggacctggtgcttgccaatgtcgcgacaggcaacaag
gccgtcaccgccagcaatgcgcggatcgggctgagcaacagcgagctcgtgccgaccggc
accaatgtcaccaccagcgccgtgcagcttgccggcagcatcccgacctgctcgagcgca
ccgcactttcctgcgttgtaa
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