Xanthomonas campestris pv. raphani: XCR_3988
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Entry
XCR_3988 CDS
T01872
Symbol
accC
Name
(GenBank) acetyl-CoA carboxylase, biotin carboxylase
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00061
Fatty acid biosynthesis
xcp00620
Pyruvate metabolism
xcp00640
Propanoate metabolism
xcp00720
Other carbon fixation pathways
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01120
Microbial metabolism in diverse environments
xcp01200
Carbon metabolism
xcp01212
Fatty acid metabolism
Module
xcp_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
XCR_3988 (accC)
00640 Propanoate metabolism
XCR_3988 (accC)
09102 Energy metabolism
00720 Other carbon fixation pathways
XCR_3988 (accC)
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XCR_3988 (accC)
Enzymes [BR:
xcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
XCR_3988 (accC)
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
XCR_3988 (accC)
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Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AEL08847
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All DBs
Position
4279006..4280373
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AA seq
455 aa
AA seq
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MLDKVVIANRGEIALRILRACHTLGIRTVAVHSTVDRNLKHVAMADESVCIGPAASSDSY
LNIPALIAAAEVTDAQAIHPGYGFLSENADFAERVEESGFIFIGPKADTIRLMGDKVEAI
RAMKAAGVPCVPGSGGPLGDEIVANTKIAREIGYPVIIKAAGGGGGRGMRVVHSEAALKA
AIETTKSEAKAAFSNDQVYMEKFLENPRHVEIQVLADGQGNAIHLGERDCSMQRRHQKVV
EEAPAPGITEELRAEIGKVCVDACIRIGYRGAGTFEFLFEGGRFYFIEMNTRIQVEHPVT
ERITGIDLVCEQLRIAAGHKLSIKQSDIVLRGHAIECRINAEDPETFMPNPGLITAFHPP
GGPGVRVDTHIYAGYKVPPNYDSMIGKLIVHGPDRETAIARMRVALSEMVVDGIKTNIPL
QQRIMRDKGFQAGGQNIHYLEKRLAERKNKSIALV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcgataaagtcgtcattgccaaccgaggtgaaatcgcgctgcgcatcctgcgcgcg
tgccacacgctcggcatccgcacggtcgcggtgcactccacggtcgaccgtaacctcaag
cacgtggccatggccgacgagtcggtgtgtatcggcccggccgcgtccagcgacagttac
ctcaacatcccggcattgatcgccgcggccgaggtcaccgacgcgcaggccatccacccc
ggctacgggtttctttcggaaaacgccgattttgccgagcgggtggaagaatccggcttc
atcttcatcggccccaaggccgacaccatccgcctgatgggcgacaaggtcgaggcgatc
cgcgcgatgaaggccgccggcgtaccgtgcgtgcccggctcgggcggcccgctgggcgat
gagatcgtggccaacaccaagatcgcgcgcgaaatcggctacccggtgatcatcaaggcc
gccggtggcggcggtggacgcggcatgcgcgtggtgcattcggaggccgcgctgaaggcg
gcgatcgaaaccaccaagtccgaagcaaaggccgctttcagcaacgatcaggtctacatg
gagaagttcctggagaacccacgccatgtggaaatccaggtgcttgccgatggccagggc
aacgccatccatctgggcgagcgcgattgctcgatgcagcgccgtcaccagaaagtggtg
gaagaagcgccggcaccgggcatcaccgaagaactgcgcgctgagatcggcaaggtctgc
gtggatgcgtgcatccgcatcggttaccgcggcgcgggcaccttcgaattcctgttcgaa
ggcggccggttctacttcatcgaaatgaacacgcgtatccaggtggaacacccggtgacc
gagcgcatcaccggcatcgacctggtgtgcgagcaactgcgcatcgccgccggccacaag
ctgagcatcaagcagagcgacatcgtgctgcgcgggcatgcgatcgagtgccgcatcaac
gccgaagacccggaaaccttcatgcccaacccgggcctgatcaccgccttccatccgccg
ggtggcccgggcgtgcgcgtggatacgcacatctatgccggctacaaggtgccgccgaac
tacgactcgatgatcggcaagctgatcgtgcacggcccggaccgcgagaccgcgatcgcg
cgcatgcgcgtggcgctgagcgagatggtggtggacggcatcaagaccaacatcccgctg
cagcagcgcatcatgcgcgacaagggtttccaggccggtgggcagaacatccactacctg
gaaaagcgactggccgaacgcaagaacaagtcgatcgcgctggtctga
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