Xanthomonas campestris pv. raphani: XCR_4000
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Entry
XCR_4000 CDS
T01872
Name
(GenBank) ice-nucleation proteins octamer repeat protein
Organism
xcp
Xanthomonas campestris pv. raphani
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Gene cluster
GFIT
Motif
Pfam:
Ice_nucleation
Motif
Other DBs
NCBI-ProteinID:
AEL08859
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All DBs
Position
complement(4286952..4291241)
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AA seq
1429 aa
AA seq
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MNREKVLALRTCTNNMSDHCGLIWPLSGIVECRHWQPSIKQENGLTGLLWGQGTNAHLNM
HADAHWVVCMVDTADIIWLGEEGMIKFPRAEVVYAGNRAGAMSCIAAGIGQHSPPKPEPP
ADSVIAAEFTPKAAHAQFTAPVVESGAHSTAPLPSPPNGIGPQAAQPSNAILRTREIATY
GSTLTGADQSQLIAGYGSTETAGNGSELIAGYGSTGVAGSDSTIVAGYGSSQTAGGGSTL
TAGYGSTQTARNGSELTAGYGSTETAGADSSLIAGYGSTQTSGGDSSLTAGYGSTQTAQN
GSDLTAGYGSTSTAGTDSSLIAGYGSTQTSGGESSLTAGYGSTQTAQDGSDLTAGYGSTG
TAGADSSLIAGYGSTQTSGNDSSLTAGYGSTQTARTGSDLTAGYGSTSTAGADSTLIAGY
GSTQTSGGDSSLTAGYGSTQTARKGSDLTTGYGSTSTAGADSTLIAGYGSTQTSGSESSL
TAGYGSTQTARKGSDLTAGYGSTSTAGADSTLIAGYGSTQTSGGESSLTAGYGSTQTARK
GSDLTAGYGSTSTAGGDSTLVAGYGSTQTSGGDSSLTAGYGSTQTARSGSDLTTGYGSTS
TAGGESTLIAGYGSTQTSGNASSLTAGYGSTQTARSGSDLTTGYGSTSTAGADSTLIAGY
GSTQTSGGESSLTAGYGSTQTARKGSDLTTGYGSTSTAGADSTLIAGYGSTQTSGGDSSL
TAGYGSTQTARKGSDLTTGYGSTSTAGADSTLIAGYGSTQTSGGESSLTAGYGSTQTARK
GSDLTTGYGSTSTAGADSTLIAGYGSTQTAGGESSLTAGYGSTQTARKGSDLTAGYGSTS
TAGSDSSLIAGYGSTQTAGFKSILTTGYGSTQTAQEGSLLTAGYGSSSTAGSDSSLIAGY
GSTQTAGFKSILTAGYGSTQTAQERSTLTTGYGSTSTAGHDSTLIAGYGSTQTAGYKSIL
TTGYGSTQTAQESSSLIAGYGSSSMAGPDSSLIAGYGSTQTAGYDSFLTAGYGSTQTAQS
SSWLITGYGSTSTASFQSSLIAGYGSTQTAGYESTLTAGYGSTQTAQEISWLTTGYGSTQ
TAGHGSILTAGYGSNSTAGYESTLIAGYGSTQTAGYESTLTAGYGSTLTALENSSLTAGY
GSTEIAGFSSTLIAGYGSSQTAGGDSTLTAGYGSTLMALDNSTLTAGYGSTETAGQDSSL
IAGYGSNLTSGVRSYLTAGYGSNQIASYGSSLIAGHESTQIAGHRSMLIAGKLSSQTAGS
RSTLIAGRGSIQTAGDRSKLIAGADSTQIAGDRSKLLAGSNSFLTAGDRSKLTAGDDCTL
MAGDRSKLTAGKNSILTAGANSRLIGSLGSTLTGGEDSVLIFRCWDGKRYTNIIAKTGEE
GVEADIAYQVDDDKNVVEKFDDPFDTIVLRHDGGPASAADHALVEQAPN
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaaaaagtcttggcattacgcacttgcacgaacaacatgtccgatcattgc
gggctgatctggccgctgtcaggcatcgtcgaatgtcggcattggcagcccagcatcaaa
caggaaaacggcttgaccggcctgttgtggggacagggcaccaacgcgcatctgaacatg
catgccgacgcgcattgggtcgtctgcatggtggacaccgccgacatcatctggctgggc
gaagagggaatgatcaagttccccagggcggaggtggtctacgccggcaaccgtgcgggc
gcgatgagctgcatcgccgccggcatcgggcagcattcgccacccaagcccgagccgcct
gcagacagcgtgattgctgcggagttcactcccaaggcggcgcatgcgcaattcactgcg
cccgttgttgaaagcggtgcgcattccaccgcgccactgccatcgccgcctaatggcatc
ggcccacaagccgcgcagccgtcaaatgcgatcctgcgaacccgcgaaatcgccacctat
ggcagcacgctcactggcgccgatcagagtcagctgatcgcaggctatggaagtaccgag
accgcggggaacggcagcgagttgatcgccggctacggcagcaccggcgtggccggatcc
gacagcaccatcgttgccggctatggcagctctcaaacggccggaggcggaagcacgctg
actgccgggtatggcagcacacagaccgcccgcaatggcagcgagctgacggccggttac
ggcagtacggaaaccgccggtgcagacagctcgctgatcgcaggctacggcagcacgcaa
acctccggcggcgacagctcgttgactgccggctatggcagtacccaaaccgcgcagaac
ggcagcgacctcaccgccggctacggcagcaccagcacggcgggcaccgatagctcgctg
atcgccggctacggcagcacccagacctcgggcggagagagctcgctcactgccggctat
ggcagcacgcagacggcgcaggacggcagcgacctcaccgccggctatggcagcacaggc
accgcaggtgcagatagctccctgattgctggttatggcagtacgcagacatccggcaac
gacagctcgctgacggcgggctacggcagcacccaaaccgcccgtaccggcagcgacctc
actgcgggttacggcagcacctccaccgctggtgcggacagcacgctgatcgccggttat
ggcagcacccagacttccggcggggacagttcgctcaccgccggctacggcagcacccaa
accgcgcgcaagggtagcgacctcacgacggggtacggcagcacctcgaccgccggcgcg
gacagcaccttgatcgccggctacggcagcacgcagacctcgggtagcgagagttcgctc
acggctggctatggcagtacgcagaccgcacgcaagggcagtgacctcaccgccggctac
ggcagcacctcgaccgccggtgcggacagcaccttgatcgccggctacggcagcacgcag
acctccggtggcgagagttcgctcaccgctggctatggcagtacgcagaccgcacgcaag
ggcagcgacctaaccgccggttacggcagtacctcgacggctggcggtgacagcacgctg
gtcgcgggctacggcagcacccagacctccggcggcgacagttcgctgaccgccggctac
ggaagcacgcagaccgcacgtagcggcagcgatctgaccaccggctatggcagcacctcg
acggctggtggcgagagcacgctgattgccggttatggcagcacgcagacatcgggcaat
gccagttcgctcactgccggctacggcagcacgcagacagcacgcagcggcagcgatctg
accaccggctatggcagcacctccactgctggcgccgacagcaccttgattgccggttac
ggaagtacccagacctccggcggggaaagttcgctcactgcaggctatggcagcacgcag
accgcgcgcaaaggcagcgacctgaccaccggctacggcagcacctccaccgccggtgcc
gacagcaccttgattgccggttacggaagtacccagacctccggcggcgacagttcgctg
accgccggctacggaagcacgcagaccgcgcgcaaaggcagcgacctgaccaccggctac
ggcagcacctccactgctggtgccgacagcaccttgattgccggttacggaagtacccag
acctccggcggggaaagttcgctcactgcaggctatggcagcacgcagaccgcgcgcaaa
ggcagcgacctgaccaccggctacggcagcacctccaccgccggtgccgacagcaccttg
attgccggttacggcagcacccagaccgctggtggcgagagctcgctgacggcgggctat
ggcagcacgcagaccgcgcgtaagggcagtgacctcaccgccggttacggcagcacctcc
accgcaggttcggacagttcgctgatcgccggctatggcagcacgcagacggccggcttc
aaaagcatcctgaccaccggctacggcagcacccagaccgcgcaagagggcagcctgctc
acggccggctatggcagttcctcaacggccggttcggacagttcgctgatcgccggctac
ggcagcacgcagacggccggcttcaaaagcatcctcaccgcaggctatggcagcacccag
accgcgcaagagcgcagcaccctcaccaccggttacggcagtacatcgacggcagggcat
gacagtacgctgatcgccggttatggcagcacgcagacggccggctacaagagcattctc
accaccggctatggcagcacccagaccgcgcaggaaagcagttcgctgatcgccggctac
ggcagttcctccatggccggcccggacagctcgctgatcgcgggttatggcagcacccag
actgccggatacgacagcttcctgaccgccggttacggcagtacccagaccgcgcagagc
agcagctggctgatcaccggatatggcagtacgtccaccgccagcttccagagttcgttg
attgccggctatggcagcacgcagacggccggctacgaaagtaccttgaccgccggctac
ggcagcacccagacggcgcaggaaatcagttggcttaccaccggctatggcagcacgcaa
acggccggccatggaagcatcctgaccgccggttacggcagcaattccaccgcaggttac
gaaagtaccctgatcgcgggctacggcagcacccagaccgcaggttacgaaagcaccctg
accgccggttacggcagcacgctgactgcgctggaaaacagttcgcttaccgccggctac
ggcagtaccgaaatcgccgggttctccagcacgctaatcgccggctatggcagcagccag
accgccggtggcgacagcaccctgacggcaggctacggcagcacgctgatggctctggac
aacagcactctgacggcaggctacggcagcaccgagaccgcagggcaggacagctcgctg
atcgcaggttatggcagcaacttgaccagtggcgtgcgcagctatctgacggccggctat
ggcagcaaccagattgcaagctacggaagctcgttgatcgccgggcacgaaagcacccag
atcgccggccatcgcagcatgctgattgcgggcaagctgagttcgcagacggccggttcg
cgcagcacgctgatcgccggcaggggcagcatccagactgcaggcgaccgcagcaagttg
atcgccggcgccgacagcacccagatcgccggcgatcgcagcaagttgttggccggcagt
aacagcttcctcaccgcaggggaccgcagcaaactcaccgcaggtgacgattgcacgctg
atggcaggcgaccgcagcaagttgaccgccggaaagaacagcatcctgaccgcgggcgcc
aacagccggttgatcggtagcctgggctccaccctcaccggtggcgaagactcggtactg
atcttccgatgctgggacggcaagcgctacaccaacatcattgccaagaccggagaggag
ggcgtggaggccgacatcgcctatcaggtcgacgacgacaagaacgtggtcgaaaaattc
gacgatccgttcgacaccatcgtgcttcggcatgatggcgggcccgcttctgcggccgat
cacgcgctggtggagcaggcgcccaattga
DBGET
integrated database retrieval system
