Xanthomonas campestris pv. raphani: XCR_4010
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Entry
XCR_4010 CDS
T01872
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00230
Purine metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
Module
xcp_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
XCR_4010 (purD)
Enzymes [BR:
xcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
XCR_4010 (purD)
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GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATP-grasp_2
RimK
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AEL08869
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Position
4302611..4303906
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AA seq
431 aa
AA seq
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MKILVIGSGGREHALAWKIAQSARVSEVLVAPGNAGTATEAKCRNVAIKVDDLDGLLALA
QREAVALTVVGPEVPLVLGVVDRFHAAGLRIFGPTAKAAQLEGSKAFAKDFLARHGIPTA
YYAVHTEVDAALAYVREKGAPIVVKADGLAAGKGVIVAMTLGEAEDAVRDMLSGNAFGDA
GARVVIEEFLDGEEASFISMVDGTHALPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVT
PEVHARVMREVVEPTVQGMIADGVPFTGFLYAGLMIDAHGAPKVIEFNVRFGDPETQPVM
LRLQSDLVDLVEAAIDGTLDTAQAQWDPRPSLGVVIAAKPYPETPVTGEVITGLDAVPAS
AKVFHAGTALNAAGEVVSAGGRVLCVAALGDSVLDAQRTAYAGLQPIQWASAFQRSDIGW
RAIARERDAQG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcctcgtcatcggctccggcggccgtgaacatgccctggcctggaagatcgcg
cagtccgcgcgcgtgagcgaggtgctggtcgcaccgggcaatgccggcaccgccaccgaa
gccaagtgccgcaacgtggcgatcaaggtcgatgacctggatggtctgctggcgctggca
cagcgcgaggccgttgcgctcaccgtggtcggtccggaagtgccgctggtgctgggcgtg
gtcgaccgcttccacgccgctggcctgcgcatcttcgggcccaccgccaaggccgcacag
ctggaaggcagcaaggcattcgccaaggacttcctggcccgccacggcattcccaccgcc
tattacgcggtccacaccgaggtggacgccgcgctggcctatgtgcgcgagaagggcgca
ccgatcgtggtcaaggccgacggcctggctgccggcaagggcgtgatcgtggcgatgacg
ctgggcgaggccgaagatgcggtgcgcgacatgctctcgggcaatgcgttcggcgatgcc
ggcgcacgcgtggtgatcgaggaatttctggacggcgaagaagccagcttcatctcgatg
gtcgacggcacacacgccttgccgatggccaccagccaggaccacaagcgcgtgggcgat
ggcgacaccggcccgaacaccggcggcatgggcgcgtattcgccggcaccggtggtcaca
cccgaggtgcatgcgcgggtgatgcgcgaggtggtcgagccgaccgtgcagggcatgatc
gccgacggcgtgccattcaccggcttcctctacgccgggctgatgatcgatgcgcacggc
gcgcccaaggtgatcgaattcaacgtgcgcttcggcgacccggaaacgcagccggtgatg
ctgcgcctgcaatcggatctggtggatctggtggaagcggccatcgacggcaccctcgac
accgcgcaggcgcagtgggacccgcgcccgtcgctgggcgtggtcatcgccgcaaagccc
tatccggaaaccccggtcaccggcgaggtcatcaccggcctggacgcggtgccggccagc
gccaaggtcttccatgccggcaccgcgctcaatgccgcaggcgaggtagtcagcgccggt
ggccgcgtgctgtgcgtggccgcgctgggcgacagcgtgctggacgcgcaacgtaccgcc
tacgccggcctgcagccgatccagtgggccagcgccttccagcgcagcgacatcggctgg
cgcgcgatcgcccgcgagcgcgacgcgcagggctga
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