Xanthomonas campestris pv. raphani: XCR_4279 Help Entry XCR_4279          CDS       T01872                                  Name (GenBank) crispr-associated helicase Cas3   KO K07012   CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] Organism xcp  Xanthomonas campestris pv. raphani Brite KEGG Orthology (KO) [BR:xcp00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:xcp02048]     XCR_4279 Enzymes [BR:xcp01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      XCR_4279 Prokaryotic defense system [BR:xcp02048]  CRISPR-Cas system   Type I CRISPR-Cas system    Type I signiture cas proteins     XCR_4279 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cas3_I-F_Cas2 Cas3-like_C_2 Cas3-like_C Cas3_HD DEAD HD Motif Other DBs NCBI-ProteinID:  AEL09135 LinkDB All DBs Position 4588353..4591724 Genome browser AA seq 1123 aa AA seqDB search MNILLISQCDKRALTETRRILDQFAERRGDRTWQTPITEAGLSTLRRLLRKTARKNSAIA CHWIRGRDHSELLWIVGDARRFNAEGAVPTNTSTRNILRLEDENDWHSAEDIRLLAQLAA LLHDLGKASVAFQARLHGNLRERNLYRHEWVSLRLFQAFVGSDDDAGWLQRLADPHAFVE ADWLANGRYQRDGIDAAARHPFRHLPPLAAAVAWLVLTHHRLPVVPVQQDNGKRQDWLGK RSLNFNPAWLEKPLSMVAHDWNEIAQPAEPDRILPYWTPAGPLPVMEPKWRAQAARLAKR LLALRLRRADIWLDNPYVLHLARLVLMLADHHYSGLTRSSPLRVQGDGKTTLYANTDRDG LKQPLDEHLLGVARDAGLIAHALPGFERHLPRLANHRGLRKRSADPRFAWQDKAFDAATA MREAARAHGAFIVNMASTGCGKTLANARILYALADPQQGLRATYALGLRALTLQTGRSFR TDLHLGEDELAIRVGGSASRALFEFYERKAEAHGSASVQDLLDEDSHVFYEGVTTDHPLL SRALHDPDTGKLLSAPMLVCTVDHMVPATESLRAGRQIAPMLRLLSADLILDELDDYDLN DLPALTRLVQWAGMLGTRVLLSSATLPPSLVTGMYLAYRAGRQQYRRNRGQDGAQADAAI DIPCLWSDEFGVQSATCVGGAGFLDQHMQFVEKRIATLAKAPALRRGELLPLELPRNLPD ADLYARFAPHVRDACLRLHHAHAEPDPVSGKRISFGLVRMANIEPLFDVAQALHAAGAPE GTQIHLCVYHARFPLLQRSAIEQQLDQAFNRRGDGNGVYRLPGIRALIDAHPAAEQLFVV LASPVCEVGRDWDADWAVAEPSSMRSLIQLAGRVQRHRGKAGDLPNVLIFDTNVRHFRRG WQDRPSYLWPGFEKAGSGQETGKFRLETPWLHELLREDDYRTLSAVPRISPRPDNAQWQS TRRLVDLEQVRIAASMLAPTQTNAALERDHAFAARKHPHAALTGVLPQQQPFRDDNQPRV TLVLLPDDDEVPRLHRVERSPDRHAADLYVLLEQSQRHDIALASAPGIGPWGRFALTDLL TEQADSLDLSLEECARKFTTVDVPASENGWRYHPWLGFAKSRG NT seq 3372 nt NT seq  +upstreamnt  +downstreamnt gtgaacatcctgctgatctcgcagtgcgacaagcgcgcgctgaccgaaacccgccgcatc ctcgaccaattcgcagagcgacgcggcgaccgcacctggcagacacccatcaccgaggcc ggcctgagcacgctgcgcaggttgctgcgcaagaccgcgcgcaagaacagcgccatcgcc tgccactggattcgtggccgcgaccattccgagttgctctggatcgtcggcgatgcgcgc cgcttcaatgccgaaggcgcagtgcctaccaacaccagcacgcgcaatatcctgcgcctc gaggacgagaacgactggcacagcgcagaggacatccgcctgctcgcccagcttgccgca ttgctgcacgacctgggcaaggcaagcgtcgccttccaggcgcgcctgcatggcaatttg cgcgagcgcaacctgtatcgccacgaatgggtgtcgctgcggctgttccaggcctttgtc ggcagcgacgacgacgcaggctggctgcagcggttggccgacccgcacgccttcgtcgag gcggactggcttgccaatgggcgctaccaacgcgatggcatcgatgcggccgcgcgccat ccctttcgccacctgccaccgcttgccgccgccgtggcctggttggtgctgacccatcac cggcttccagtcgtaccggttcagcaggacaacggcaaacgacaggattggctaggcaag cggtcgctgaacttcaacccagcctggctggaaaagcctctgtcgatggtggcgcacgac tggaatgaaatcgcccagcccgccgaacccgatcgcatcctgccgtactggacgcctgcc ggacccttgccggtcatggaaccgaagtggcgcgcacaggccgcgcgattggccaagcgc ctgcttgcactgcgcctgcgtcgcgccgatatctggctggacaatccttacgtcctgcat cttgcgcggctggtgctgatgctggccgaccatcactactccggcctgaccaggagctcg ccgctgcgcgtgcagggcgatggcaagacgacgctctacgccaataccgaccgcgatggc ctcaagcaaccgttggacgagcacctgctcggcgtcgcccgcgatgccgggctgatcgcg catgccctgcccggcttcgagcgccacctgcccagactggccaaccaccgcggcctgcgc aaacgtagcgccgatccacgtttcgcctggcaggacaaggcattcgacgcagccaccgca atgcgcgaggcagcgcgcgcgcacggcgccttcatcgtcaacatggcctccaccggctgc ggcaagaccctggccaacgcacgcatcctttatgcactggccgatccgcagcagggcctg cgcgccacctacgccttgggcctgcgcgcactcaccctgcagaccgggcgcagcttccgc accgatctgcatctgggcgaggacgaactggccatccgcgtcggcggctcagccagccgc gcgttgttcgagttctacgaacgcaaggccgaagcgcacggctcggcatcggtgcaggat ctgctcgacgaagacagccatgtgttctacgagggcgtgactaccgatcatccgctgctt tcgcgtgcgctgcacgatccggacaccggcaaactgctgtcggcgcccatgctggtctgc accgtggaccacatggtgccggccaccgaatcgttgcgtgccggccgccagatcgcaccg atgctgcgcctgctgagcgccgacctgatcctggacgaactggacgactacgacctcaac gacctgcccgcgctgacgcgactggtgcagtgggcaggaatgctgggcacgcgcgtgctg ctgtcctcggctacgctaccgccgtcgttggtgaccggcatgtacctggcctatcgtgcc ggccgccagcagtaccggcgcaaccggggccaggatggcgctcaagccgacgcggcgatc gacattccctgcctgtggagcgacgagttcggtgtgcagtccgccacctgcgtcggcggc gcaggctttctcgaccagcacatgcagttcgtcgaaaaacgcattgccacgctcgccaag gcccccgccctgcggcgtggcgaactgctgccgctggagctgccgcgcaacctgccggac gcagacctgtatgcgcggttcgcaccgcatgtgcgagacgcctgcctgcgcctgcaccac gcgcatgccgaacccgatccggtcagcggcaagcgcatcagcttcgggctggtgcgcatg gctaatatcgagccgctgttcgacgtggcgcaggcgctgcatgcggctggcgcgccggag ggcacgcagatccacctgtgcgtctatcacgcccgctttccgctgctgcagcgctcggcg atcgagcagcaactcgaccaggccttcaaccggcgcggcgatggcaatggcgtctaccgc ctaccgggcatccgcgccctgatcgacgcgcaccccgcagccgagcaactgttcgtggtg ctggcctcgccggtgtgcgaggtcggccgcgattgggatgccgactgggcggtggccgag ccctcctccatgcgctcgctgatccagctggccgggcgcgtgcagcgccatcgcggcaag gctggcgatctgcccaacgtgctgatcttcgataccaacgtacggcatttccgccgaggc tggcaggatcggcccagctatctctggccaggcttcgagaaagcaggaagcggccaagag acaggcaaattccggctggaaacgccgtggctacacgaactgctgcgcgaggacgactac cgcacactcagtgccgtgccacgcatcagcccgcgccccgacaacgcgcagtggcagtcc accaggcgcctggtggatctggagcaggtgcgcatcgccgccagcatgctggcaccgacg caaaccaacgcggcgctggagcgcgaccacgccttcgccgcccgcaaacacccgcatgcc gccctgaccggtgtgctgccgcaacagcaaccgttccgcgacgacaaccagccgcgcgtc accctggtgttgctgccggacgacgacgaggtgccgcgactgcatcgcgtcgagagatcc ccggaccgtcatgccgccgacctgtatgtcctcctcgaacagagccagcgccatgacatc gcgctggcatcggcgccaggcatcggcccctggggccgcttcgcgttgacggacctgctc accgagcaagccgattccctcgacctgtcgctggaggagtgcgccaggaaattcaccacc gtagacgtgccggccagcgaaaacggctggcggtatcacccgtggctggggtttgcgaag agccgaggatga

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