Xanthomonas campestris pv. raphani: XCR_4298
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Entry
XCR_4298 CDS
T01872
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcp03016
]
XCR_4298
Enzymes [BR:
xcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
XCR_4298
Transfer RNA biogenesis [BR:
xcp03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
XCR_4298
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEL09154
LinkDB
All DBs
Position
complement(4609928..4610704)
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AA seq
258 aa
AA seq
DB search
MACAVGDADNPPVSTSPDPLQILYQDAVLAVVDKPAGLMVHDSKLARGEDDFLADRLRVQ
LGRPIFLVHRLDRATSGCLLLAFDRDTASALGKALMAGEVEKDYLAICRGWPAEVQLIVD
HDLDGGPGKPIKKPAVTHFQRLATGELEIPSTGFATSRYALLRCQPRTGRFRQIRRHLKH
LSHHMIGDTSHGDGRHNRSFRMLGIHRMLLHAERLGFPHPADGRRISVVAPLDVEFAKAC
ALFGWDVAGLQGGTTHVQ
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggcatgcgctgtcggcgatgcggataatccgccggtgagcacatcccctgatccattg
cagattctctaccaggacgccgtcctggccgttgtcgacaaacccgcgggcctgatggtc
cacgacagcaagctggcgcgcggggaagacgattttcttgcggaccgcctgcgcgtgcag
ctgggccgcccgatctttctggtgcaccggctcgatcgcgccaccagcggctgcctgttg
ctggccttcgatcgcgacaccgccagcgcgttgggcaaggccttgatggccggcgaggtg
gagaaggattatctggccatctgccggggctggcccgctgaggtgcagctcatcgtcgat
cacgatctggacggcggcccgggcaaaccgatcaagaagccggcggtgacccacttccag
cgcctggccaccggcgagctggagatcccgtccaccggctttgccacctcgcgctatgcc
ttgctgcgctgccagccgcggaccgggcggtttcgccagatccgccggcatctcaagcac
ctgtcgcatcacatgatcggcgacaccagccatggcgatggccgccacaaccgcagcttc
cgcatgctcggcatccaccgcatgttgctgcatgccgaacgcctgggcttcccgcatcct
gccgatggcaggcgcatcagcgtggtggcgccgctggatgtggagtttgcgaaagcgtgt
gcgttgttcgggtgggacgtggcggggttgcaaggcggcacgacacacgtgcagtga
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