Xanthomonas campestris pv. raphani: XCR_4329
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Entry
XCR_4329 CDS
T01872
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00860
Porphyrin metabolism
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01120
Microbial metabolism in diverse environments
xcp01240
Biosynthesis of cofactors
Module
xcp_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
xcp_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
XCR_4329 (hemD)
Enzymes [BR:
xcp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
XCR_4329 (hemD)
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Ortholog
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GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AEL09185
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Position
4637203..4638003
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AA seq
266 aa
AA seq
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MLLSHNPEMTHTRTTATSWTLLSLRPNGEHAPLRRAVARHGGQLLAVSPWRLQINDTPQA
RDALRQALGAPIVVFTSPAAVHAAHRLLPLQRPGPAQWASVGEGTARALQACGIDAVVRP
ARMDSEGLLALPVFDAPLQAVGLVTAPGGRGMLAPALEQRGARILRADVYQRVALRLRAS
TLHALETEMPRSVMALSSSEALTLIVQQLPPSLATALKTRPVVASSDRMLEAARAAGFVQ
VHRAEGPLPAQLAAAAAAIMTPPPPC
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctctcgcataatcccgagatgacccacacgcgcacaactgccacgtcctggacc
ctgctgtcgctgcgtcccaacggcgagcacgcgccactgcggcgtgcggtggcccggcat
ggcggccagttgctggcggtgtcgccatggcgcctgcagatcaacgacacgccgcaggca
cgcgatgcgctgcggcaggcactgggcgcgccgattgtcgtgttcaccagcccggccgcc
gtgcacgcggcgcaccggctgctgcccttgcagcggcctggaccggcccagtgggcaagc
gtgggcgaaggcacggcgcgggcgctgcaggcctgcgggatcgacgcggtggtgcgcccg
gcgcgcatggacagcgaaggcctgctggcactgccggtgttcgatgccccgctgcaggcc
gtgggcctggtcaccgcgcccggcggccgcggcatgctggcgccggcgctggagcagcgc
ggtgcgcggatcctgcgcgcagatgtgtatcagcgtgttgcgctccggctgcgtgcgtcg
acgctgcacgcgctggagactgagatgccacgcagcgtgatggccttgagcagcagtgaa
gcgctgacgttgatcgtgcagcagttgccgccgtcattggccactgcattgaagacccgc
ccggtggtcgcctccagcgaccgcatgctggaagccgcccgcgctgccggcttcgtgcag
gtccatcgcgcggagggcccactgcctgcgcaattggcagccgccgccgctgcgatcatg
acgccgccgccaccttgctga
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