Xanthomonas campestris pv. raphani: XCR_4389
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Entry
XCR_4389 CDS
T01872
Name
(GenBank) transcriptional regulator LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcp03000
]
XCR_4389
Transcription factors [BR:
xcp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
XCR_4389
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_6
HTH_3
HTH_23
MarR_2
HTH_24
HTH_Crp_2
HTH_Tnp_ISL3
HTH_29
HTH_17
HHH_5
HTH_7
DUF3853
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AEL09245
LinkDB
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Position
complement(4697825..4698883)
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AA seq
352 aa
AA seq
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MPARKNPEEGMPGLPKGKVATINDIARMSGVSKKTVSRIINNSPLVRQDTREKVEALMRE
VGYAPDPLARGLAFRRSFLIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSP
GYIEGVRRFAQAQKLHGVILVPRASEDQALADMLAEIGCRYTRIASIALDTTSQTVITHD
RDGAAEAADYLLSLGHRDIALVTGPSAYRSSIERTAGFADALTRRGIELPPERIVEAGYT
FESGVAAAEKLLLGKKRPTAIFTGNDEMAAGIYKVALRAGINIPRQLSVIGYDDSSLASR
LWPPLTSVRRHTRDTGRTAAAMLIQPDNAPQLPTASVRPHLIVRDSCQPPED
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgcaagaatcccgaagagggaatgcccggcctgccgaagggcaaggtagca
acgatcaacgacatcgcgcggatgtcgggcgtgtccaagaagaccgtctcgcggatcatc
aacaactcgccgctggtgcggcaggacacccgcgagaaggtcgaggcgctgatgcgcgag
gtgggctacgcgcccgacccgctcgcccgcgggctggcgttccggcgctcgttcctgatc
ggcatggtctacgacaaccccaccgcgcagtacatcgtggacatgcagtacggcgcgctg
gacgccttgcgtggctccagcttcgagctggtggtgcacccctgcgacagccgcagcccg
ggctatatcgaaggtgtgcgccggtttgcccaggcgcagaagctgcacggggtgatcctg
gtgccgcgtgcctccgaggaccaggcgctggccgacatgctggccgagatcggctgccgc
tacacccgcatcgcctcgatcgcgctggacaccacctcgcagacggtgatcacccacgac
cgcgacggcgcggccgaggcggccgactacctgctctcgctcggccaccgcgacatcgcc
ctggtcaccggccccagcgcctatcgctcctcgatcgagcgcaccgccggctttgccgac
gccttgacccggcggggcatcgaactgccgcccgagcgcatcgtggaggccggctacacc
ttcgaatcgggcgtggctgcggcggaaaagctgctgctgggcaagaagcgccccaccgcc
atcttcaccggtaacgacgaaatggccgccggtatctacaaggtcgccctgcgcgccggc
atcaacatcccgcgccagctgtcggtgatcggctacgacgatagctcgctggcctcgcgc
ctgtggccgccgctgacctcggtgcgccgccacacccgcgacaccggccgcaccgccgcc
gccatgctgatccagcccgacaacgccccgcagctacccaccgccagcgtgcgcccgcac
ctgatcgtgcgcgactcctgccaaccgccggaagattga
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