Xanthomonas campestris pv. raphani: XCR_4438
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Entry
XCR_4438 CDS
T01872
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00052
Galactose metabolism
xcp00511
Other glycan degradation
xcp00600
Sphingolipid metabolism
xcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
XCR_4438
09103 Lipid metabolism
00600 Sphingolipid metabolism
XCR_4438
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XCR_4438
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
XCR_4438
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N
Glyco_hydro_2_N2
BetaGal_gal-bd
Invasin_D3
Big_1
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
AEL09294
LinkDB
All DBs
Position
complement(4757169..4760045)
Genome browser
AA seq
958 aa
AA seq
DB search
MQQQATTAAQRVSECGVGVAMTGAMRLRVVLYRLCRRARDGRPGTTQQPLQRSLRAGCMA
LTCLCTTAGVVTAAEPTNAPRERISLNADWRFQRGDPPGNTVRLEYDVRPEVVRSEDGKV
ADARPEQAQHIDADARDVLKPWILPTANSLIADPTQRHVRPPGHPGSAVAYVQPTFDDSA
WQRVDLPHDWAIAGPFLADGPHGGMGRLPSWGVGWYRKALQIPASDRGRSLFLDLDGAMS
YATVWLNGKLVGGWPYGYTSWRVDLTPYVVPGGHNQLAIRLDNPPDSARWYPGGGLYRNV
WLTKTGPLRVAQWGTQLSTPQVSAERAQVQLAVQLDNAGAAPVQAQVSTALYALDDASGL
RRGPAVAQIAAVQVQVAAGGSARVQGSTQIEAPRRWGPPPTQQPHRYVAVTEVSQGGRVV
DRVETPFGVRSVVFDPDKGLVINGEHVPIRGVNNHHDLGALGAAFNVRAAERQLQLLQQM
GANAIRMSHNPPAPELLELTDRMGLLVVDEVFDSWEMKKTPLDFHLIFPQWHEPDLRAML
RRDRNHPSIILWSVGNEVGEQYTGEAGAAIARRLHAIVHAEDPTRPATAAMNYASPEMPL
PAALDVISLNYQGEGIRDTPEFEGTERIRKLPQYPAFHAKFPRKAILSSETASALSSRGV
YLFPVSAQSSAPVRDGRGGDSVAHQVSAYELHAVDFGSSADKVFAALDRHPFVAGEFVWT
GFDYLGEPTPYYSSRSSYSGILDLAGFPKDRYWLYQARWRPELPMAHLLPHWSWPGREGQ
VTPVHVFTSGDEAELFVNGVSQGRKRKAPLQYRLRWDAVVYQPGELRVQAYKHGKPWASD
RVQTAGRATRMQLSADRSRIRGDGKDLSFITVRLLDANGRPAPTAGDRLRFRVEGAGELV
ATDNGDPTNLEAFVLPERNAFNGLCLVIVRAKPGAQGPITVHVQSDTLQSASVQVRAE
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaggcaaccacggccgcacagcgcgtgagcgagtgcggcgtaggtgtggcg
atgaccggtgccatgcgcctacgcgttgtgctgtatcgcctctgcaggcgtgcacgcgat
gggcgcccaggcactacgcagcagccgctgcagcgcagcctgcgcgctggatgcatggcg
ctgacctgcctctgcactaccgcaggtgtggtcacagcggcggagccaaccaacgcgccg
cgcgaacggatctcgctcaacgccgactggcgcttccagcgtggcgacccgcctggcaat
accgtgcggctggagtacgacgtacgcccggaggtggttcgcagcgaagacggcaaggtg
gccgatgcgcggcccgagcaggcgcaacacatcgacgccgacgcgcgcgacgtgctcaaa
ccgtggatcctgccgactgccaatagcctgatcgccgaccccacgcagcggcatgtgcgc
ccgcccgggcacccgggcagtgcggtggcctacgtgcagcccacgttcgatgacagcgcg
tggcagcgcgtggacctgccacacgattgggcaatcgcagggccgttcctggccgatggc
ccgcatggcggcatggggcgattgccgagctggggcgttggctggtatcgcaaggcgctg
cagattccggccagcgaccgcggccgctcgctgtttctcgatctcgatggcgcgatgtcc
tacgccaccgtctggctcaacggcaagctggtgggcggctggccgtacggctacaccagc
tggcgcgtggatctcacgccgtacgtggtgccgggcgggcacaaccagctcgcgatccgg
ctggacaacccgcctgattcggcgcgttggtatcccggtggtggcctgtatcgcaacgtc
tggctgaccaagaccggcccgctccgcgttgcccagtggggcacgcagctgagcacaccg
caggtgtcggccgagcgcgcgcaggtgcagctggcggtgcagctggacaatgccggtgcc
gcccccgtgcaggcgcaggtgagcaccgcgctgtacgcgctggatgacgccagcggcctg
cgccgtggcccggcggtggcgcagattgccgcggtgcaggtacaggtggcggcgggtggc
agtgcacgcgtgcagggcagtacgcagatcgaggcgccacggcgttggggcccaccaccg
acacagcaaccgcatcgctatgtcgcggtgaccgaggtcagccagggtgggcgcgtggtc
gatcgtgtcgaaacgccgttcggcgtgcgcagcgtggtcttcgacccggacaagggcttg
gtcatcaacggcgaacatgtgcccatccgcggggtcaacaaccatcacgatctgggcgcg
ctcggggccgcgttcaacgtgcgcgccgccgagcggcagctgcagttactgcaacagatg
ggcgccaatgccatccgcatgagccacaacccgcccgcgccggaattgctggagctcacc
gaccgcatgggcctgctggtggtggacgaggtgttcgacagctgggaaatgaaaaagacc
ccgctggatttccacctgatctttccgcagtggcacgagccggatctgcgcgccatgctg
cgccgcgaccgcaaccatccctccatcatcttgtggagcgtgggcaacgaagtgggcgag
caatacaccggcgaagcgggcgccgcgatcgcgcgcaggctgcacgccatcgtgcacgcc
gaagaccccacgcgcccggcgacggcggcgatgaactacgcctcgcccgagatgccgttg
ccggcggcgctggatgtgatcagcctcaattaccagggcgaaggcatccgcgatacgccc
gagttcgaaggcaccgagcgcatccgcaagctgccgcaatacccggccttccatgccaaa
ttcccgcgcaaggccatcctcagcagcgagacggcctcggcgctgagcagccgcggcgtg
tacctgtttccggtaagtgcgcagagcagcgcgccggtgcgcgatggccgcggcggcgat
tcggtggcccaccaggtcagcgcgtatgaactgcacgcggtggatttcggctccagtgcc
gacaaggtctttgccgcgttggatcggcatccgttcgtggccggcgagtttgtgtggacc
ggcttcgactatctcggcgagcccacgccgtactacagctcacgcagttcctattccggc
attctggatttggctggcttccccaaggaccgctactggctttaccaggcgcgctggcgg
ccggagctgccgatggcgcacctgctgccgcactggagctggccggggcgcgagggccag
gtgacgccggtgcacgtgttcacctctggcgacgaggccgagctcttcgtcaacggcgtc
tcgcaaggccgcaagcgcaaggcgccgttgcagtaccggctgcgctgggatgcggtggtg
taccaaccgggcgagctgcgcgtgcaggcctacaaacatggcaagccgtgggccagcgac
cgtgtgcagaccgccggccgcgccacgcgcatgcagctcagcgccgaccgcagccggatc
cgtggcgatggcaaggacctgagtttcatcaccgtgcgcctgcttgatgccaacgggcgc
cctgcaccgactgcaggcgaccgcctgcggttccgcgtggaaggcgcaggcgaactggtc
gccaccgacaacggtgacccgaccaacctggaggctttcgtcctgcccgagcgcaacgcc
ttcaacggtctgtgcctggtgatcgtgcgcgccaaaccgggcgcgcaggggccgatcacc
gtgcatgtgcaatccgacacgctgcagtccgccagcgtgcaggtgcgggcagaatga
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