Xanthomonas campestris pv. raphani: XCR_4482
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Entry
XCR_4482 CDS
T01872
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XCR_4482 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcp03400
]
XCR_4482 (mutM)
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
XCR_4482 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
XCR_4482 (mutM)
DNA repair and recombination proteins [BR:
xcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XCR_4482 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AEL09338
LinkDB
All DBs
Position
complement(4809395..4810276)
Genome browser
AA seq
293 aa
AA seq
DB search
MFACLHHHVVCSGLLPCVESICMPELPEVETTLRGLAPHLVGQRIHGVILRRPDLRWPIA
EQIEQLLPGATITDVRRRAKYLLMDTDAGGSAVLHLGMSGSLRVLPGDTPPRAHDHVDIS
LQNGRVLRFNDPRRFGCLLWQRDGETHELLASLGPEPLSGAFTGDYLHALARGRRAAVKT
FLMDQAVVVGVGNIYAAESLHRAGISPLREAGKVSRERYRRLADAVKEILAYAIQRGGTT
LRDFISPDGAPGYFEQELMVYGREGEACRHCGGELKHATIGQRATVWCAACQR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgcctgcctgcaccaccatgtggtgtgctccggtctgttgccgtgtgtcgagtcg
atctgcatgcctgagcttcccgaagtcgaaaccaccttacgtgggctggccccgcatctg
gtggggcaacgcatccatggcgtgatcctgcggcgacctgacctgcggtggccgattgca
gagcagatcgaacagttgctgccaggcgccacgattaccgatgtgcgtcggcgggcgaag
tatctgctgatggataccgatgcaggcggcagtgcagtgctgcatttggggatgtcgggc
agcctgcgggtcttgccgggcgatacgccaccacgcgcgcacgaccatgtggatatcagc
ctgcagaatgggcgcgtcctgcggttcaacgacccacgccgctttggttgcctgttatgg
cagcgcgatggcgaaacgcatgagctgctggccagccttgggccagaaccattatctggc
gcatttacgggcgattatctgcacgcattggcacgcggtcgccgtgcggcggtcaagacg
ttcttgatggaccaggcggtggtggtcggcgttggcaatatctatgcggcagagagcctg
catcgcgcaggaatcagcccgctgcgggaggctggcaaggtgtcgcgggagcgctatcgg
cggctggcggatgcggtgaaggaaatcctggcctatgcaatccagcgcggtggaaccacg
ctgcgcgatttcatcagcccggacggcgcgcccggttatttcgagcaggaactgatggtg
tatggccgcgaaggcgaagcctgcagacactgcggtggcgagttgaagcacgccacaatc
ggccaacgcgccacggtgtggtgtgcggcttgccagcgctag
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integrated database retrieval system
