Xanthomonas campestris pv. raphani: XCR_4594
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Entry
XCR_4594 CDS
T01872
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcp03016
]
XCR_4594 (trmE)
Transfer RNA biogenesis [BR:
xcp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
XCR_4594 (trmE)
Prokaryotic type
Methyltransferases
XCR_4594 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
MCM
AAA_28
ABC_tran
T6SS_Tsi2-like
GTP_EFTU
AIG1
AAA_22
Ras
AAA_21
AAA_29
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEL09445
LinkDB
All DBs
Position
complement(4934652..4935992)
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AA seq
446 aa
AA seq
DB search
MNASPSTIVAIATAAGTGGIGIVRLSGPQSVQIAAALGIAGLQSRHARYARFRDAQGEVI
DDGIAVWFPAPHSFTGEEVVELQGHGSPVLLRQLVARCIALGARQARAGEFSERAFLNGK
LDLAQAEAIADLIAAGDLRAARAARRSLDGVFSRRVDAVSESLTRLRIHVEAAIDFADEP
LDTLGGAQVREELTRTRALLAQLLRDAERGRKLRDGLHAVLIGPPNAGKSSLLNALAGSD
RAIVTDVAGTTRDTLHEAIQLDGFELTLVDTAGLREGGDAIEREGMRRARAELQRADLAL
IVVDARDPQAARDALGDAIDAVPRRLWIHNKCDLLAVAGPMDADAIAVSAVTGQGLEHLH
TRLRELALGDGIESVDGEFSARTRHVDALHRAEQHADAADLELRYEQLELAAEELRLAHE
ALGEITGKLSADDLLGKIFSSFCIGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttcgccttccaccatcgttgccatcgccactgctgccggaactggcggtatc
ggtatcgtgcggctgtccggcccgcagtctgtacagatcgccgccgcgctgggcatcgcc
ggactgcaatcgcggcatgcgcgttacgcgcgctttcgtgatgcgcagggcgaggtgatc
gatgacggcatcgcggtgtggttccccgcgccgcacagcttcaccggcgaagaggtggtg
gagctgcagggccacggcagcccggtgctgctacggcaattggtggcccgctgcatcgcg
ctgggtgcacgccaggcgcgtgcgggtgagttcagtgagcgggccttcctcaacggcaaa
ctcgacctggcacaggccgaagcgattgccgacctgatcgccgccggcgatctgcgcgca
gcgcgtgcggcgcgcagatcgctcgacggtgtgttctcgcggcgcgtggatgcggtgagt
gagagcctcacgcggttgcgcatccatgtggaagcggcgatcgactttgccgacgagccc
ctcgacacgctgggcggcgcgcaggtgcgcgaggagctcacccgcacgcgcgcattgctt
gcgcagctgttgcgcgatgccgaacgtggacgcaagttgcgcgatggtttgcacgcagtg
ctcatcggtccgcccaacgccggcaagagttccttgctcaatgccttggccggcagtgat
cgggcgatcgtgaccgatgttgccggtaccacgcgcgataccttgcatgaagcgatccag
ctcgatggattcgaactgaccctggtcgataccgcaggcctgcgcgagggcggcgatgca
atcgagcgcgaaggcatgcgccgcgcgcgcgccgaactgcagcgtgccgacctggcgctg
atcgtggtggatgcacgtgacccgcaggccgcgcgcgatgccctcggcgatgccattgat
gcggtaccgcgccggttgtggatccacaacaaatgcgacctgctggcggtggctgggcca
atggacgccgatgcgatcgcggtgtctgcggtgaccgggcaggggctggagcacctgcac
acccgcctgcgcgaactggcgctgggcgatggcatagaaagcgtggatggcgaattttca
gcgcgcacgcggcatgtcgatgcattgcaccgcgccgaacaacatgccgacgccgcagat
ctggagctgcgctacgagcagctcgaactggccgccgaagaactgcgcctggcgcatgaa
gccctcggcgaaatcaccggcaagctcagcgcggacgatttactcggcaagatcttttcg
agtttttgtatcgggaagtaa
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