KEGG   Xanthomonas citri pv. citri MN11: J163_02610
Entry
J163_02610        CDS       T03780                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xcr  Xanthomonas citri pv. citri MN11
Brite
KEGG Orthology (KO) [BR:xcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xcr03400]
    J163_02610
Enzymes [BR:xcr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J163_02610
    5.6.2.6  RNA 3'-5' helicase
     J163_02610
DNA repair and recombination proteins [BR:xcr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J163_02610
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HTH_9 PhoH Extensin-like_C DUF5805 AAA_25
Other DBs
NCBI-ProteinID: AJZ00308
LinkDB
Position
complement(2838998..2843392)
AA seq 1464 aa
MHPVLQHFHPVVAAWFAQTFAAPTPAQIAAWPAIQAGRHTLVAAPTGSGKTLTAFFAAID
ALIRDGLANGGALPDETRVVYVSPLKALSNDIHLNLDAPLQGIRAALVAGGLPDVPIRTA
VRTGDTPQRERAQARRTPPHILVTTPESLYVLLGSASGRTSLRQVRTVIVDEIHAVASDK
RGSHLSLTLERLQRLVAQPITRVGLSATQKPIETVAQFLVGVDADGVPPPCEIVDIGYTR
RRDLALALPPTPLSVVMSNDQWLQVYADVAALAQQHRTTLVFVNTRRMAERAARHLGDLL
GKQRVSAHHGSLSRETRLLAEQRLKAGDLTVLVATASLELGLDIGDVDLVCQLGSPRSIA
TFLQRAGRSGHKVGGTPKARLFPQTRDELVECAALLDSIRRGELDALRIVPAPLDVLAQQ
IVAEAACEDWDEDALFALVRRAWPFAGLSRATFDSVVRMLCDGFSTRLGPRAGYLHRDAV
HRRLHARRGARMTALTSGGTIPETGDYSVVLEPQAEKIGTVNEDFAVESLTGDVFQLGNA
SYRILRVEAGRVRVEDAKGAPPNIPFWLGEAPGRSDELSAAVSRLRGEIAARLDTAPHQA
ARDWLQRELEMSAEAARQLVDYLANACTGLGAMPTQQCLVMERFFDASGGTQLVIHSPYG
SRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTSHSFALEEVGRYLHSSSAEHVL
IQALLDAPLFGVRWRWNATNAMALPRFSGGNKVAPQLQRMKSEDLLATVFPDQVACAENL
VGEREVPDHPLVAQTLEDCLHHAMDSEGWLQVLRGLESGAVTLVARDLAAPSPLAAEALN
ARPYAFLDDAPLEERRTQAVQSRRYTPQTSDDLGQLDPQAIAAVCEEAWPQPRDAEEMHE
ALVGLGVLPVAEATDARWQAWLAALAAAGRASCIAMHGIPALWISAERIDWFLPLYRQAT
AQPPLQAPADCRVADWQRDWAVRELLRGRLSAVGPAQVPALSNALQVPEPEIVLALAALQ
REGYVMAGRFSAHVQAEEWCERHLLARIHRYTLGRLRREIEPVSQRDYARFLFEWQHVDS
SSRVAGPDALAGVVGQLEGFEAPAVLWESELLPARIRDYQPAWLDELCTAGRTLWARLRP
GSGRGGGALRSTPIVLLPRREAQRWSALARDADDAPLGSRAQRVMQVLQQQGALFFDEIA
DAAHLMNTELEDALSELVMRGRAHCDSYAGLRALLVPASKRPSALSRQRRRASALGIRDA
GRWAPARALPDLPLAEAAQRHQDTLEHLARTLLRRYGVVCWRLLEREAAWLPPWRELLRM
YQRLEARGEIRGGRFIAGLSGEQFALPDAIAALRRVRAQPLPQQWICVSASDPSNLLGSL
LPGERVARVPGNRVVSLDGLPMAVWAADRFQALQELTPEQAEQALRLLQRGPGAAEQSPM
ERLLAQSPASTVPFPVTRGSGRDK
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgcatcctgtcctgcaacacttccatcctgtggtcgctgcatggttcgcgcagaccttc
gctgcgccgacaccggcgcagatcgctgcgtggccggcgatccaggccggacgccacacg
ctggtggccgcgcccaccggctcgggcaagacgctaacggcgttcttcgccgccatcgat
gcgttgatccgcgacgggctggccaatggcggtgcgttgcccgacgaaacccgtgtggtc
tacgtctcgccgttaaaggccttgtccaatgacatccacctcaacctggacgcgcccttg
cagggcatccgtgcggcgctggtcgccggcggcttgccggatgtgccgattcgtaccgcg
gtgcgtaccggcgacaccccgcagcgcgagcgcgcgcaggcgcgtcgcacgccgccgcat
attctggtgaccaccccggagtcgctgtacgtgctgttggggtcggcatccgggcgcacg
tcgctgcggcaggtgcgcaccgtgatcgtcgatgaaatccacgcggtggcgtcggacaag
cgcggcagccacctgagcctgacgctggagcgcttgcagcggctggtcgcgcagccgatc
acgcgggtggggctgtcggcgacgcagaagcccatcgaaacggtggcgcaattcctggtc
ggtgtcgacgcagacggcgtgccgccgccgtgcgagatcgtcgatatcggctacacccgc
aggcgtgatctggccctggcgttgccgcccacgccgctgagcgtggtgatgtccaacgac
cagtggctgcaggtgtatgccgatgtggccgcactggcgcagcaacatcgcaccacgctg
gtgttcgtcaacacgcggcgcatggccgaacgcgcggcgcggcatctgggcgatctgctc
ggcaaacagcgcgtgtcggcgcatcacggcagcctgtcgcgcgagacgcgcctgctggcc
gagcaacggctcaaggccggcgatctcaccgtgttggtggcgaccgcttcgctggaactg
gggctggatatcggcgatgtcgatctggtctgccagctcggttcgccgcgctcgatcgcc
accttcctgcaacgtgccgggcgttccggacacaaggtcggcggtacgcccaaggcgcgc
ctgtttccgcagacccgcgacgaactggtcgaatgcgccgcgctgctggacagcatccgc
cgcggcgaactggatgccttgcgcattgtgccggcgccgctggacgtgctggcgcagcag
atcgttgccgaagccgcatgcgaagactgggacgaagatgcgctgttcgcgctggtgcgg
cgcgcgtggccgttcgccgggttgagccgtgccaccttcgacagcgtggtgcgcatgttg
tgcgatggcttcagcactcggctcggtccgcgcgccggatatctgcatcgcgatgcggtg
catcggcgcttgcacgcacggcgcggtgcgcgcatgacggcgctcacctccggcggcacc
attcccgaaaccggcgactacagcgtggtgctggaaccgcaggccgaaaagatcggcacg
gtgaacgaggatttcgccgtcgaaagccttaccggcgatgtgttccagctcggcaatgcg
agttaccgcatcctgcgcgtggaggccgggcgcgtgcgcgtggaagatgccaagggcgcg
ccgccgaacattccgttctggctgggcgaagcgccgggtcgtagcgatgagctgtctgcg
gcggtgtcgcgcctgcgtggcgagattgccgcgcggctggacaccgcgccgcaccaggcg
gctcgcgactggctgcagcgcgagctggagatgtccgccgaagcggcgcgacaactggtg
gattatctggcaaacgcttgcaccggattgggcgcgatgccgacccagcagtgcctggtc
atggagcgcttcttcgatgccagcggcggtacccagctggtcatccattcgccgtacggc
agccgcatcaatcgtgcgtgggggctggcgctgcgcaagcgcttctgccgcaccttcaat
ttcgaattgcaggctgcagccaccgaagatgcgattgtgctgtcgctgtcgaccagtcat
agctttgcgctggaagaagttggccgttacctgcattcgtcgtcggccgagcatgtgctg
atccaggcattgctggatgcgccgctgttcggcgtgcgctggcgctggaacgccaccaac
gccatggcgctgccgcgcttcagtggcggcaacaaggtggcgccgcagttgcaacgaatg
aagtccgaagatttgctcgccacggtattcccggaccaggtggcctgtgcggaaaatctg
gtcggcgaacgcgaggtgcccgaccacccgttggtggcacagaccctggaagattgcctg
caccacgccatggatagcgaaggctggctgcaggtgttgcgcggcctggaatcgggcgcg
gtgacgctggtcgcgcgcgacctggcggcgccgtcgccgctggccgccgaagccttgaac
gcgcgtccctatgcatttctcgacgatgcgcccctggaagaacgccgtactcaggccgtg
caaagtcggcgctatacgccgcagaccagcgacgacctgggacagctcgatccgcaagcg
attgccgcagtgtgcgaagaagcctggccacagccgcgcgatgccgaagaaatgcacgag
gcactggtggggctgggcgtgttgccggtcgcagaggccaccgatgcgcggtggcaggca
tggttggccgcgctggccgcagctggtcgtgccagctgcattgccatgcatggcatcccg
gcgctgtggatcagcgccgagcgcatcgactggttcttgccgttgtatcggcaagcaact
gcgcagccgccgctgcaggcgccggccgattgccgcgttgccgactggcagcgcgactgg
gcggtgcgcgaactgctgcgcgggcgcttgtccgccgttggcccggcacaggtgccggcc
ttgtccaatgcgttgcaggtgcccgagccagagatcgtgctggcgttggcggccttgcaa
cgcgagggctacgtcatggccgggcggttcagtgcgcacgtgcaggccgaagagtggtgc
gagcgccatctgttggcacgcatccaccgctacacgttggggcgtctgcgccgcgagatc
gaaccggtatcgcagcgcgattacgcgcgttttctgttcgagtggcagcacgtggacagc
agcagccgggtggctgggccggatgcgctggccggcgtggtggggcagctcgaaggcttc
gaggcgcctgcggtgctgtgggagagcgagctattgccggcgcgcatccgcgactatcaa
ccggcctggctggacgagttgtgcaccgccgggcgcacgctgtgggcacgcttgcggccc
ggcagcggccgcggcggcggcgcactgcgcagcacgccgatcgtgctgctgccacggcgc
gaagcgcagcgttggagcgcattggcgcgcgatgccgacgacgcgccattgggctcccgc
gcgcaacgcgtcatgcaggtgctgcagcagcaaggcgcgctgttcttcgatgaaatcgcc
gacgcggcgcatctgatgaacaccgagctggaagatgcattaagcgagctggtgatgcgc
ggccgcgcgcattgcgacagctatgccggtctgcgcgcgctgctggtgccggcgtccaag
cggccgtcggcactgtcgcggcagcgtcgccgcgccagcgcgctgggcatccgcgatgcg
ggtcgctgggcgccggcgcgggcgctgcccgacttgccgcttgccgaagccgcgcagcgc
catcaggacacgctcgaacacctcgcgcgcacgctgttgcggcgctacggcgtggtgtgc
tggcggctgctcgaacgcgaggccgcatggctgccgccgtggcgggaattgctgcgcatg
tatcaacggctggaagcgcgcggcgaaatccgcggcgggcggttcatcgccgggctgtcc
ggcgagcagtttgcgttgccggacgcgattgcggccttgcgccgtgtgcgcgcgcagcca
ttgccgcagcagtggatctgcgtcagtgccagcgacccaagcaatctgctcggcagtctg
ctgccgggcgagcgggtcgcgcgcgtgccgggcaatcgtgtcgtttcgctggatgggctg
cccatggcggtctgggcggcagaccgcttccaggccttgcaggagcttacgcccgagcaa
gccgagcaggcgctgcgtctgctgcagcgcggaccgggcgcggcagaacaatcgccgatg
gagcgcttgttggctcaatcgccggcaagcaccgtgccttttccggtcacgcgcggaagc
ggacgcgataaatag

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