Xanthomonas cerealis: KHA79_00485
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Entry
KHA79_00485 CDS
T10673
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xcs Xanthomonas cerealis
Pathway
xcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KHA79_00485 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcs03400
]
KHA79_00485 (recD)
Enzymes [BR:
xcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KHA79_00485 (recD)
DNA repair and recombination proteins [BR:
xcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KHA79_00485 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
AAA_22
Helicase_RecD
UvrD_C
DEAD
T2SSE
nSTAND3
Herpes_Helicase
AAA_16
SLFN-g3_helicase
AAA_28
SRP54
Rad17
ATPase
Motif
Other DBs
NCBI-ProteinID:
UKE47278
LinkDB
All DBs
Position
110987..112984
Genome browser
AA seq
665 aa
AA seq
DB search
MNQPNLLAALHRSGTLRTLDHAFAQTLSRLDPTTPDLVLSAAALASLAVASGHAGLDPAR
ANVLLDPRDGPPPHLPDPADWQRALSASRWIAQPAPEEPAAADCPLVLEHGLLYLRRYRE
YERRLAQGLRRLAAQPLPPFAVTTLAPLFATLFPNAAASLLPSGEGARSAGEGTGITAPP
NDHQAQAAALALRRALLLVTGGPGTGKTTTIARLLLLRIAQAQATATAAPRIALAAPTGR
AAERMAESLRAAVARALDHGIDPALAAALPAGASTLHRLLGVIPDVPRFRFDADNPLPFD
LIVVDEASMVDLPLMCKLVEAVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDALQ
ADDAQALHPLLGHTRSDTHRGGLAGHRVHLLRGYRQAQGFELAPLADAVRAGDADTALAL
LRSGELAGVHFHEDSEDPLAARRDALLAHWRALADAEDPATALRDAARLRLLTAVRAGAQ
GARGLNARIEHLLADSGAGARRLGAASPWFHGRLLLVTENSYRHGLFNGDVGICLRDAQG
ALVAWFEGEGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDDVWLQLPSRDARVLSREL
VYTGLTRARQRLHLAASEAVLRAALARHAARISGLAWRLGGEQEAAPATQVVETSTDTPV
QGALF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaacccaacctgctagccgccttgcaccgcagcggcaccctgcgcacgctcgac
cacgccttcgcccagaccctgagccgcctggacccaaccacccccgacctggtcctgtcc
gccgccgccctggcctcgctcgccgtcgccagcggccacgccggcctggaccccgcccgc
gccaacgtcctgctcgacccgcgcgacggcccgccgccgcacctcccggaccccgccgac
tggcaacgcgccctgtccgcctcgcgctggatcgcccagcccgcccccgaagaaccggcg
gccgccgactgcccgttggtgctggaacacggcctgctctacctgcgccgctaccgcgaa
tacgagcgccgcctcgcgcagggcctgcgccgcctcgccgcgcaaccgctgccgcccttc
gccgtcactactctggcaccgctgttcgcgacgttgttcccgaacgcagccgcttccctt
ctcccctcgggtgagggcgcccgaagcgcgggtgagggtacgggcatcaccgcccccccc
aacgaccaccaagcccaagccgccgcactcgccctgcgccgcgccctgctgctggtcacc
ggcggccccggcaccggcaagaccaccaccatcgcgcgcctgctgctgctgcgcatcgcg
caagcacaggccaccgcgaccgccgccccgcgcatcgccctggccgcccccaccggccgc
gccgccgaacgcatggccgaaagcctgcgcgcagcggtagcgcgcgcgctcgatcacggc
atcgacccggccctggccgccgcgctacccgctggcgccagcaccctgcaccgcctgctc
ggcgtcatccccgacgtgccgcgcttccgctttgatgccgacaacccgctgccgttcgac
ctgatcgtggtcgacgaagcctccatggtcgacctgccgctgatgtgcaaactggtcgaa
gccgtcgccgacggcacccaattgatcctgctcggcgacgccgaccagctgccctcggtg
gaagccggcgacgtgctcgccgcgatcctgcaggccgccggccccggcgatgccctgcaa
gcggacgacgcgcaagcgctgcacccgctgctcggccacacccgcagcgacacgcaccgc
ggcggactcgccggccaccgcgtgcacctgctgcgcggttaccgtcaggcgcagggtttc
gaactcgccccactggccgatgccgtgcgcgctggcgacgccgacaccgccctggccctg
ctgcgcagcggcgaactggccggcgtgcacttccacgaagacagcgaggacccgctcgcc
gcccgccgcgacgccctgctcgcgcactggcgcgccctggccgacgccgaagaccctgcg
accgccctgcgcgacgccgcccgcctgcgcctgctcaccgccgtgcgcgccggcgcgcaa
ggcgcccgcggcctcaacgcccgcatcgaacacctgctggccgacagcggcgccggcgcc
cgccgcctcggcgccgcctcgccctggttccatggccgcctgctgctggtcaccgagaac
agttaccgccacggcctgttcaacggcgacgtcggcatctgcctacgcgacgcgcagggc
gccctggtggcctggttcgaaggcgagggcgacggccaggtccgcggcttccaccccgcc
gcgctgcccgcgcacgaaagcgccttcgccatgaccgtgcacaaggcgcaaggcagcgag
ttcgacgacgtctggctgcaattgcccagccgcgacgcgcgcgtgctcagccgcgaactg
gtctacaccggcctcacccgcgcacgccagcgcctgcacctggccgccagcgaagccgtg
ttgcgcgccgcgctggcaaggcatgccgcgcggatctcggggttggcgtggcgcttgggt
ggggagcaagaggcggcacccgccacgcaagtggtggaaacatccacggacacgcccgtg
cagggtgcgttgttctaa
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