Xanthomonas cerealis: KHA79_00735
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Entry
KHA79_00735 CDS
T10673
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xcs Xanthomonas cerealis
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcs03032
]
KHA79_00735
03400 DNA repair and recombination proteins [BR:
xcs03400
]
KHA79_00735
Enzymes [BR:
xcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KHA79_00735
DNA replication proteins [BR:
xcs03032
]
Prokaryotic type
DNA Topoisomerases
KHA79_00735
DNA repair and recombination proteins [BR:
xcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KHA79_00735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
UKE47314
LinkDB
All DBs
Position
169125..170339
Genome browser
AA seq
404 aa
AA seq
DB search
MSNASRTTAATEAARALQPRQAARSAGLVYVSDEEPGIARRRAGTGFGYRLPDGRPVRDA
QTLQRIRQLAIPPAYTEVWICTKPNGHVQATGRDARRRKQYRYHTDWAQLRGDGKFERII
AFGQALPRLRRRLRRDLALPGYPRDKVLAMVVALMAETLVRVGNAEYARSNRSYGLTTLR
NRHLEFVNGGRARLKFRGKGGQEHDIEVDDAHLVKLIRGCQQLPGQALFQYRDDDGQLQP
VDSGEVNDYLREAMGESFTAKDFRTWGGTRAALQRLAQLPLPEPSSERALKLAQNAVIRE
VADALGNTPAVCRKAYIDPCVFDGWRGGELHGLCERVRGERQWDLVTLNYLAQARAATRK
AAKTVGAKKAGSKAADAKPAKSIAPRRAGGSAAKNAARPRGRAG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcgtcccgcaccactgccgccaccgaggcggcccgcgcgctgcagcccagg
caggccgcccgcagcgcaggcctggtctatgtcagcgacgaagagcccggcatcgctcgc
cgccgcgctggcaccggcttcggctaccgccttcccgacggccgcccggtgcgcgatgcg
cagaccctgcagcgcatccgccagctggcgatcccgcctgcctataccgaggtatggatc
tgcaccaagcccaacggccatgtacaggccaccggccgcgacgcgcggcggcgcaagcag
tatcgctaccacaccgactgggcgcagctgcgcggcgacggcaagttcgagcggatcatc
gccttcggccaggccttgccgcgcttgcgccggcgcctgcgccgcgaccttgcgctgccc
ggctacccgcgcgacaaggtgctggcgatggtggtggcgctgatggccgagactctggtg
cgcgtgggcaatgccgaatacgcgcgcagtaaccgctcctatggcctcaccacgctgcgc
aaccggcacctggaattcgtcaacggcggccgcgcgcggctgaagttccgcggcaagggc
gggcaagagcacgacatcgaggtcgacgacgcgcatctggtcaagctgatccgcggctgc
cagcaattgcccgggcaggcgctgtttcagtaccgcgacgacgacggccagctgcagccg
gtggactcgggcgaggtcaacgattacctgcgcgaggcgatgggtgagagcttcaccgcc
aaggacttccgcacctggggcggcacccgcgccgcgctgcaaaggctggcgcagctgccc
ttgcccgaacctagcagcgagcgcgcgctgaagctggcccagaacgcggtgatccgcgag
gtggccgacgcgctgggcaataccccggcggtgtgccgaaaggcctatatcgacccgtgc
gtgttcgacggctggcgcggtggcgaactgcacggcctgtgcgagcgcgtgcgcggcgag
cggcagtgggatttggtcacgctgaactacctggcgcaagcgcgcgccgcgacccgcaag
gcggccaagacggtcggggccaagaaagcgggttccaaagcggccgacgccaagccggcg
aagtccatcgccccgcgtcgggctggcggcagcgcggccaagaacgccgcgcgtccacgc
ggccgtgccggctga
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