Xanthomonas cerealis: KHA79_03435
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Entry
KHA79_03435 CDS
T10673
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xcs Xanthomonas cerealis
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KHA79_03435
Enzymes [BR:
xcs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
KHA79_03435
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
UKE47755
LinkDB
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Position
complement(815339..816943)
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AA seq
534 aa
AA seq
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MQRLLSLLLCCCVFCGALPAAAQSGNFGVTHSGKRIVVDSGAHLVFSVDTGNGDIVSMRY
DGSELQSPEGKGSQIASGLGTAAVAARTIGDTIVVSAKAGDLTQYYMARKGRDALYMATY
APTLLPIGELRFVTRLDVAKLPNAEREPDCNVGEAIESHDVFLLPDGRTSSKFYSARRAI
DDAMHGVSGPGVAVYMLMGDRERSSGGPFFKDIATQKTAATHELYNYMFSNHTQTEPYRG
GLHGVYALLFTDGGAPSAAATDLGFVDATLGLQGFLDESGRGAVSGRVSGVAAGQPARVG
LSNDDTQYWAAAAANGTFRIDGVRPGRYRITLYQNELEVAQNTLEVYAGATAQAALQAAT
QPGQMQWQIGVPDGTPSGFRNAALLASAHPSDTRMAPWGPLVYRVGSSALGDFPAVQWRG
VNTPTRIEFVLAAKDVRDYRLRLYIPLAQADGRPQVRVNGRWNGPLPSVPTQPDSRGITR
GTYRGNNTVYDIDIPATALQAGVNAVQIDIASGSPDNGFLGPALVFDSVQLLVM
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcctgctctccctgctcctgtgctgctgcgttttctgcggcgccctgcccgcc
gcggcgcaaagcggaaacttcggtgtcacccacagcggcaagcgcatcgtcgtcgatagc
ggcgcccacctggtgttcagcgtggacaccggcaacggcgacatcgtgtcgatgcgttac
gacggcagcgagctgcagagtcccgaaggcaaaggttcgcagatcgcctccggcctcggc
acggccgcggtcgcggcacgcaccatcggcgacaccatcgtggtctcggccaaggccggc
gacctgacccagtactacatggcgcgcaaaggacgcgacgcgctgtacatggcgacctat
gcgcccacgctgctgccgatcggcgaactgcgcttcgtcacccggctcgatgtcgccaag
ctgccgaacgccgagcgcgaacccgactgcaacgtcggcgaggcgatcgagagccacgac
gtgttcctgctccccgatggccgcaccagttccaagttctactcggcgcggcgcgcgatc
gacgacgccatgcacggcgtcagcggtcccggcgtggcggtctacatgctgatgggcgat
cgcgaacgcagttccggcggcccgttcttcaaggacatcgccacgcagaaaaccgcggcg
acccacgaactgtacaactacatgttttccaaccacacccagaccgaaccctaccgcggc
ggcctgcatggcgtgtacgcgctgctgttcaccgatggcggcgcgccctcggctgcggcc
accgatctgggcttcgtcgatgcgacgctggggctgcagggcttcctggacgaaagcggc
cgcggcgcggtgtccggccgcgtgtccggcgtcgccgccgggcaaccggcgcgggtcggc
ctgagcaacgacgacacgcagtactgggccgcggccgcggccaacggcacgttccggatc
gacggcgtgcgaccgggacgctatcgcatcaccctgtaccagaacgagctggaggtggcg
cagaacacgctcgaggtgtatgccggcgcgaccgcgcaggcggccttgcaggcagcgacg
caaccaggccagatgcagtggcagatcggcgtgcccgacggcaccccgagcggtttccgc
aatgccgccctgctcgccagcgcgcatccttccgacacgcgcatggcgccctggggtccg
ctggtgtaccgggtcgggagcagcgccctcggcgatttcccggccgtgcagtggcgtggg
gtcaacacgcccacccgcatcgaattcgtattggccgccaaagacgtccgcgactaccgc
ctgcgcctgtacatcccgctggcgcaggccgacggccgcccgcaggtgcgggtgaacggg
cgctggaacgggccgctgccatcggtccccacgcagccggacagccgcggcatcacccgc
ggcacctaccgcggcaacaacaccgtgtacgacatcgacatcccggccacggcattgcag
gccggggtcaatgcagtgcagatcgacatcgcctccggctcgcccgacaacggattcctc
ggcccggcgctggtcttcgatagcgtgcagttgctggtcatgtag
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