Xanthomonas cerealis: KHA79_04735
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Entry
KHA79_04735 CDS
T10673
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xcs Xanthomonas cerealis
Pathway
xcs00300
Lysine biosynthesis
xcs00470
D-Amino acid metabolism
xcs01100
Metabolic pathways
xcs01110
Biosynthesis of secondary metabolites
xcs01120
Microbial metabolism in diverse environments
xcs01230
Biosynthesis of amino acids
Module
xcs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KHA79_04735
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KHA79_04735
Enzymes [BR:
xcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KHA79_04735
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UKE47978
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Position
complement(1108518..1109714)
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AA seq
398 aa
AA seq
DB search
MSLHIDPAPLASALAQLRERGDGPLCAYVYDLAALRCHATAMRTQLPAYCELYYAAKANA
EPPLLRTLAPSVDGFEAASGGELQWLRQHQPGRPLLFGGPGKLDAELQLAVSLPECTLHV
ESLGELQRLARIAAQAGRRVPLFLRMNIAVPGMRDTRLMMGGRPSPFGLDALDLETAMRL
LRDAPALQLAGFHFHLMSHQCDAQAQLRLVAGYLQTVQGWRQAYALGPLTVNAGGGFGVN
YADAAASFDWTGFCAGLPAILCAHDDGLRLRLEPGRYVSASCGWYLMEVLDIKRSHGEFF
AIGRGGTHHFRTPAAQGHDHPFLVLRGTQPPVLRDTRVTLVGQLCTPKDVLARAQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMLFVDAAG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcacatcgatccggcaccgctggcgagcgcgctggcgcagttgcgcgagcgt
ggcgacgggccgctgtgcgcctacgtctacgacctggccgcattgcgctgccacgccacc
gcgatgcgcacccagctgccagcctattgcgagctgtactacgcggccaaggccaatgcc
gagccgccgctgctgcgcacactggcgccatcggtggacggtttcgaggcggcgtccggc
ggcgaactgcagtggctacgccaacatcaaccgggccggcctctattgttcggcggcccc
ggcaagctcgacgccgaactgcagctggccgtgtcattgcccgagtgcacgctgcacgtg
gagagcctgggcgaactgcagcggctggcgcgcatcgccgcgcaagcagggcgccgcgtg
ccgctgttcctgcgcatgaacatcgccgtgcccggcatgcgcgacacgcgcctgatgatg
ggcgggcggccgtcgccgttcgggctggacgcgctggacctggagacggccatgcgcctg
ctgcgcgacgccccggcgctgcagctggccggcttccacttccacctgatgtcgcaccag
tgcgacgcgcaagcgcagttgcgcctggtcgccggctatctgcagaccgtgcagggctgg
cgccaggcctacgcactgggtccgctgacggtgaacgccggtggcggcttcggcgtgaac
tacgccgatgcggcggcctcgttcgactggaccgggttctgcgccggcctgccggcgata
ctgtgcgcgcacgacgacggcctgcgcctgcgcctggagccgggccgctacgtcagcgcc
agctgcggctggtacctgatggaggtgctcgacatcaagcgcagccatggcgaatttttc
gccatcggccgcggcggcacgcatcattttcgcactccggccgcgcaaggccacgatcat
ccgttcctggtactgcgcggcacgcaaccgccggtgttgcgcgacacgcgggtgaccctg
gtcggccagttgtgcacgcccaaggacgtgctggcgcgcgcgcaaccggtcgcggccctg
gcgccgggcgactgcctggccttcccgctcgccggcgcctatgcctggaacatctcgcac
cagcagttcctgatgcacccgccgccgcagatgctattcgtggacgctgcaggctag
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