Xanthomonas cerealis: KHA79_06965
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Entry
KHA79_06965 CDS
T10673
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xcs Xanthomonas cerealis
Pathway
xcs03018
RNA degradation
Brite
Enzymes [BR:
xcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KHA79_06965
Messenger RNA biogenesis [BR:
xcs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KHA79_06965
Ribosome biogenesis [BR:
xcs03009
]
Prokaryotic type
rRNA helicases
KHA79_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UKE48352
LinkDB
All DBs
Position
1617707..1619704
Genome browser
AA seq
665 aa
AA seq
DB search
MSQDTPAPLLFADLGLSPAVMKAVADVGYESPSPIQAATIPALLTGRDLLGQAQTGTGKT
AAFALPILSRLDFNQRKPQALVLAPTRELAIQVAEAFHRYAGAIPGFQVLPVYGGQPYVQ
QLSALKRGVHVVVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIDDVEAVLKKL
PASRQVALFSATMPTAIKRIAQTYLNDPAEVIIASKTTTSANVRQRYWAVSGLHKLDALT
RILEVEPFDAMIVFARTKAATDELAQKLQARGLAAAAINGDIQQSQRERVIQQLKDGKLD
ILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPREKGML
RAIERATRQPIEEMQLPSVDAVNDQRVTRFMEKISETIASGGIDTYRDLLQRFETEKNVP
MVEVAAALARLLQGDTPLLLAPERARPPQGERFERPTAERRERGERSERPKFEPKFDREA
HPPRRDEGERAPRVPRPAPAGHGPDFDYQRDVGSFEAPRRDKAPKAPRGEPEVGMETYRI
EVGHQHGVKPANIVGAIANEAGLESKYIGRIDIHDDHSVLDLPADMPNELLTHLKKVWVS
GQQLQMRKLDAAAAGASAPFKPKFARAAGKPGGRPNAAGPRPAGAATRMADKAGDRPPRK
GPPKR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagatacccccgcgccgctgctgttcgcagatctcggcctctcgcctgctgtg
atgaaggccgttgccgatgtcggctacgagtcgccgtcgccgatccaggccgccaccatt
cccgcgctgctgaccggccgcgacctgctcggccaggcccagaccggcaccggcaagacc
gccgcgttcgcgctgccgatcctgtcgcggctggacttcaaccagcgcaagccgcaggcg
ctggtgctggcgccgacccgcgagctggcgatccaggtcgccgaggcgttccatcgctac
gccggcgcgatccccggcttccaggtgctgccggtgtacggcggccagccctacgtgcag
cagctgtcggcgctcaagcgcggcgtgcacgtggtggtgggcaccccggggcgggtcatc
gaccacctggagcgcggcaccctggacctgtcggagctgaagacgctggtgctcgacgag
gccgacgagatgctgcgcatgggcttcatcgacgacgtcgaggcggtgctgaagaagctg
ccggcctcgcgccaggtggcgctgttctcggcgaccatgccgaccgcgatcaagcgcatc
gcgcagacctatctgaacgatccggccgaagtcatcatcgcctccaagaccaccacgtcg
gcgaatgtccgccagcgttactgggcggtcagcggcctgcacaagctcgatgcattgacc
cgcatcctggaagtggagccgttcgacgcgatgatcgtgttcgcgcgcaccaaggccgcc
accgacgagctggcgcagaagctgcaggcgcgcggcctggccgccgcggcgatcaacggc
gacatccagcagtcgcagcgcgagcgggtgatccagcagctcaaggacggcaagctcgac
atcctggtcgccaccgacgtggccgcgcgcggcctggacgtggagcggatcagccacgtg
ctgaactacgacatcccgtacgacaccgaaagctatgtgcaccgcatcggccgcaccggc
cgcgccggccgcagcggcgaggcgatcctgttcgtcagcccgcgcgagaaaggcatgctg
cgcgcgatcgagcgcgccacccggcagccgatcgaagagatgcagctgccgagcgtggac
gcggtcaacgaccagcgcgtgacccgcttcatggagaagatcagcgagaccatcgccagc
ggcggcatcgacacctaccgcgatctgctgcagcgtttcgagaccgagaagaacgtgccg
atggtcgaggtggccgcggcgctggcgcgcctgctgcagggcgacacgccgctgctgctg
gcgccggagcgggcgcgtccgccgcagggcgagcgcttcgagcggcccactgccgagcgc
cgcgagcgcggcgagcgcagcgaacgtcccaagttcgagcccaagttcgaccgcgaagcg
cacccgccgcgccgcgacgaaggcgagcgcgcaccgcgtgtgccgcgtcccgcgccggcc
ggacacggccccgacttcgactaccagcgcgacgtcggcagcttcgaggcgccgcgtcgc
gacaaggcgcccaaggcgccgcgcggcgagccggaagtgggcatggagacctaccgcatc
gaggtcggccatcagcacggggtcaagccggccaacatcgtcggcgcgatcgccaacgag
gccggcctggagagtaaatacatcggccgcatcgacatccacgacgaccattcggtgctg
gacctgccggcggacatgccgaacgagctgctgacccacctgaagaaggtctgggtgtcc
ggccagcaactgcagatgcgcaagctcgacgccgccgccgccggtgccagcgcaccgttc
aagccgaagttcgcgcgtgcagccggcaagcccggcgggcggccgaacgcggccggtccg
cgcccggccggcgccgccacgcgcatggccgacaaggccggcgatcgcccgccgcgcaag
ggtccgcccaagcgctga
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