Xanthomonas cerealis: KHA79_09800
Help
Entry
KHA79_09800 CDS
T10673
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
xcs Xanthomonas cerealis
Pathway
xcs02020
Two-component system
xcs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KHA79_09800
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
KHA79_09800
02025 Biofilm formation - Pseudomonas aeruginosa
KHA79_09800
09142 Cell motility
02040 Flagellar assembly
KHA79_09800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcs03000
]
KHA79_09800
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xcs02035
]
KHA79_09800
Transcription factors [BR:
xcs03000
]
Prokaryotic type
Helix-turn-helix
Other families
KHA79_09800
Bacterial motility proteins [BR:
xcs02035
]
Flagellar system
Flagellar assembly proteins
Others
KHA79_09800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
AAA
AAA_7
bpMoxR
AAA_22
TIP49
MCM
UPF0175
Motif
Other DBs
NCBI-ProteinID:
UKE48825
LinkDB
All DBs
Position
complement(2244952..2246442)
Genome browser
AA seq
496 aa
AA seq
DB search
MSESRILVIDDDAVRAERTVSLLEFMDLNPRWVTDVADVNPGRHRQSEWMAILVGGLDDQ
AQADAFFGWVARSPLPPPVLLLNGEAQAFAQRHGLHEANVWQLEAPLRHAQLETLLRRAS
LKRLDAEHQAGAVQDSGPTGNSDAVVRLRRLIDQVAAFDTTVLVLGESGTGKEVVARAIH
QQSPRRDGPFVAINCGAIPPDLLESELFGHEKGSFTGALSARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNVTIRCNVRVIAATHRNLEERIAGNQFREDLFYRLN
VFPIEMPALRERSDDLPALVNTIAAQLARTGRGEVRFSEEALQALRGYDWPGNVRELTNL
VERLAVLHPSGLVRVQDLPARYRGDFASSIDVSAPPAPIAAPDPRRLPNVVDLHVGPKAL
SDPSESAAQAAATLPESGLDLRGHMANIELALINEALERTQGVVAHAAQLLGLRRTTLVE
KLRKYGIDRDQTELAS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatcgcggatcctggtgatcgacgacgacgcggttcgcgccgagcgcacggtg
agcctgctcgaattcatggacctcaacccgcgctgggtgaccgacgtggccgacgtcaac
cctggccgccaccggcagagcgagtggatggcgatcctggtcggcggactcgacgaccaa
gcccaggccgacgcgttcttcggctgggtcgcgcgcagtccgctgccgccgcctgtgctg
ctgctcaacggcgaggcgcaggcgttcgcgcagcgccacggcctacacgaggccaacgtg
tggcagctggaagcgccgctgcgccacgcgcagctggaaaccctactgcgccgagccagc
ctcaagcgtctggacgcagagcaccaggccggcgcggtgcaggacagcggcccgaccggc
aacagcgacgcggtggtgcggctgcggcggctgatcgaccaggtcgccgcgttcgacacc
accgtgctggtgctgggcgagtccggcaccggcaaggaagtggtggcccgcgcgatccac
cagcaatcgccgcgccgcgacggcccgttcgtggcgatcaattgcggcgcgatcccgccg
gatctgctggaaagcgaactgttcggccatgagaaaggctccttcaccggcgcgctgtcc
gcgcgcaagggccgtttcgagatggccgagggcggcaccctgctgctcgacgagatcggc
gacatgagcctgccgatgcaggtcaagctgctgcgcgtgctgcaggaacgcagctttgag
cgggtcggcggcaacgtcaccatccgctgcaacgtgcgcgtgatcgccgccacccaccgt
aatctggaagagcgcatcgccggcaaccagttccgcgaggacctgttctaccggctcaac
gtgttcccgatcgagatgccggcgctgcgcgagcgcagcgacgacctgccggcactggtc
aacaccatcgccgcgcagttggcgcggaccgggcgcggcgaagtgcgcttttccgaagaa
gcgctgcaggcgctgcgcggctacgactggccgggcaacgtacgcgagctgaccaacctg
gtcgagcgcctggcggtgctgcatcccagcggcctggtgcgggtgcaggacctgccggcg
cgctaccgcggcgacttcgcctcctcgatcgacgtgtcggcgccgccggcgccgatcgcc
gcgccggatccgcgccgcctgcccaacgtggtcgacctgcacgtcggtcccaaggcgctg
tccgatccgtccgagtcggccgcacaggccgccgcgacgctgccggagagtggactggac
ctgcgcgggcacatggccaacatcgaactggcgctgatcaacgaagcgctggagcgcacc
caaggcgtggtcgcgcatgcggcgcagctgctgggcctgcgtcgcaccacgctggtggag
aaattgcgcaagtacggcatcgaccgcgaccagaccgaactggccagctga
DBGET
integrated database retrieval system
