Xanthomonas cerealis: KHA79_11980
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Entry
KHA79_11980 CDS
T10673
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xcs Xanthomonas cerealis
Pathway
xcs00541
Biosynthesis of various nucleotide sugars
xcs01100
Metabolic pathways
xcs01250
Biosynthesis of nucleotide sugars
Module
xcs_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KHA79_11980 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xcs01005
]
KHA79_11980 (kdsB)
Enzymes [BR:
xcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
KHA79_11980 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xcs01005
]
Lipid A
KHA79_11980 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF7161
Motif
Other DBs
NCBI-ProteinID:
UKE49031
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Position
complement(2751813..2752589)
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AA seq
258 aa
AA seq
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MHAPPPPFVVAIPARYAASRLPGKPLRLLGGEPLVRHVARRALGAGAQQVWVAADDPRIA
AAVADLEGVHVVLTSAAHVSGTDRLAECADLAGWDDATLVVNLQGDEPFAPAAGIVVVAQ
ALAASGAEMATLGTPVESAESLFDPNVVKLVRNAQGDALYFSRAPIPWHRDAFAASRARL
PPGPWLRHIGIYAYRAGFLRRFAAMPPGGLEQLEALEQLRVLEAGFRIAVALSPEPFPPG
VDTPEDLARAEAHLQALA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgccgccgccgccgttcgtggtcgccattccggcgcgctacgccgcttcgcgc
ctgcccggcaagccactgcgcctgctcggcggcgaaccgctggtacggcatgtggcgcgc
cgtgcgctcggcgccggtgcgcagcaggtgtgggtggccgcggacgatccgcgcatcgcc
gcggcggtggccgatctggaaggcgtgcacgtggtgctgacctcggcggcgcacgtctcc
ggcaccgatcgcctggccgaatgcgccgacctcgccggctgggacgacgccaccctggtg
gtcaacctgcagggcgacgaaccgttcgcgccggccgccggcatcgtcgtggtggcgcag
gcgctggccgccagcggcgcggagatggcgacgctgggcacgccggtggaatcggccgag
agcctgttcgatccgaacgtggtcaagctggtgcgcaacgcacagggcgatgcgctgtat
ttcagccgcgcgccgatcccctggcaccgcgacgcgttcgccgcctcgcgcgcacggctg
ccgccaggcccgtggctgcgccatatcggcatctacgcctaccgcgccgggttcttgcgc
cgtttcgcggcgatgccgccgggcggcctggaacagctggaggcgctggagcagctgcgg
gtgctggaagccggcttccgcatcgcggtggcgctgtcgcctgagccgttcccgcccggg
gtggacacgcccgaggacctggcccgcgccgaggcgcacctgcaggccctggcatga
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