Xanthomonas cerealis: KHA79_12380
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Entry
KHA79_12380 CDS
T10673
Name
(GenBank) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xcs Xanthomonas cerealis
Pathway
xcs00040
Pentose and glucuronate interconversions
xcs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KHA79_12380
Enzymes [BR:
xcs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
KHA79_12380
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
UKE45952
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Position
2841015..2842691
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AA seq
558 aa
AA seq
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MTTASAMSRLNLALPLLAIASLHANAAVHPPLAQRDQTPNVSTGWGTIDQPTLPQNVCMT
LAATLQPIGGSLDGVDADPAYSAPDTLRIQDAISDCPAGSAVQLVTGAHGESGFLSGPLT
LKSGVTLWIDQGVTLFGSRNPRDYDNGLGTCGIANTDKGKSCKPLIYGNAISNSGVVGDG
KIDGRGGSVLTAGPNAGKRSWWDVAYQNVSQGLVQHAPRLLQIDNSKDFTLYALTLENSP
NFHVVTDNVSGVTAWGIKILSPSLVYTRPGYACPAGSTPDQRTPATCFTPETAKNTDGFD
PGQSRNVLLAYSYISTGDDDVAIKAHASAKSSNPSTDMAFVNNQFYYGHGMSFGSETDTS
IRRVLVQNLSIDGFNSNDAIKDPAANNGLRIKSDRTRGGQVSDITFENICMRNVARPLVF
DAFYSKPANADLGSAYPRFDNITLRNMHSLGSRDFGAGQLSFYGYRDAKLSYPITLALDN
VVLEGGAISFAAPHNGGPNANPAATHFRFTGGPVSFANLLAPSTQYDVQLQGQPGTGKPL
DCSAAFVTYSSVLADSPI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgcaagcgcgatgtcccgtctcaacctcgccctgccgctgctggcgatcgcc
tcgctgcatgccaacgcagccgtgcacccgcctctcgcccagcgcgaccagacacccaac
gtcagtaccggatggggcacaatcgatcagccaacgctgccgcagaacgtgtgcatgaca
ctggcagcgacgctgcaaccgatcggcggctcgctcgacggcgtcgatgccgacccggcc
tactcggcgccggacacgctgcgcatccaggatgcaatcagcgactgccctgccggcagc
gcggtgcagctggtgaccggcgcccatggcgaatccggcttcctcagcggtccgctgacc
ctcaagagcggcgtgacgctgtggatcgaccagggcgtcaccttgttcggctcgcgcaat
ccgcgcgactacgataacggcctgggcacctgcggcatcgccaacaccgacaagggcaaa
tcctgcaagccgctgatctacggcaacgcgatcagcaacagcggcgtggtcggcgacggc
aagatcgacggacgcggcggcagcgtgctgaccgcaggccccaacgccggcaagcgcagc
tggtgggacgtggcctaccagaacgtgagccaggggctggtgcagcacgcgccgcgcctg
ctgcagatcgacaacagcaaggatttcaccctgtatgcgctgaccctggagaattcgccc
aatttccatgtggtcaccgacaacgtcagcggcgtgaccgcctggggcatcaagatcctc
agcccgagcctggtctacacccggccaggctacgcttgcccggccggcagcacgccggac
cagcgcacgcccgccacctgcttcaccccggaaacggccaagaacaccgacggtttcgac
cccggccagtccaggaacgtgctgctggcgtattcctacatcagcaccggcgacgacgac
gtggccatcaaggcgcacgcgagcgccaaatccagcaatccgtccaccgacatggccttc
gtcaacaaccagttctactacggccatgggatgtcgttcggcagcgaaaccgatacgagc
atacgccgcgtgctggtgcagaacctgagcatcgacggcttcaacagcaacgacgcgatc
aaggaccccgccgccaacaacggcctgcgcatcaagtccgaccgcacccgtggcggtcag
gtctccgatatcaccttcgagaacatctgcatgcgcaacgtggcgcgcccgctggtgttc
gacgcgttctacagcaagccggccaatgccgatctcggcagcgcgtacccgcgtttcgac
aacattacgctgcgcaacatgcattcgctgggttcacgcgacttcggcgcaggccagttg
agtttctacggttaccgcgacgcgaagctgtcctatccgatcacgctcgcactggacaac
gttgtgctcgagggcggcgccatttccttcgccgcgccgcacaatggcgggccgaacgcc
aatccggcggccacgcacttccgcttcaccggcggaccggtcagtttcgccaacctgctg
gccccttccacccagtacgacgtgcaattgcagggccagcccggaaccggcaagccgctg
gactgcagcgctgcattcgtcacctacagcagcgtgctggccgattcgccgatctga
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