Xanthomonas cerealis: KHA79_13870
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Entry
KHA79_13870 CDS
T10673
Name
(GenBank) alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
xcs Xanthomonas cerealis
Pathway
xcs00511
Other glycan degradation
xcs04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
KHA79_13870
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
KHA79_13870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcs04147
]
KHA79_13870
Enzymes [BR:
xcs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
KHA79_13870
Exosome [BR:
xcs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
KHA79_13870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
F5_F8_type_C_2
CBM_AftD
DUF3999
TAT_signal
GHL6
Motif
Other DBs
NCBI-ProteinID:
UKE49062
LinkDB
All DBs
Position
complement(3203711..3205639)
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AA seq
642 aa
AA seq
DB search
MIDRRTFLATGVVAVAAGFSASAAQIAAAPRPKGPAPWGAVPSARQLRWHRWEQYAFVHF
AMNTFTDKEWGYGDEDPRKFDPSDFSADQIVAAAKAGNLKGIIFTAKHHDGFCLWPTRLT
EHCIRNSPYKNGNGDIVGEMAAACRRAGLAFGVYLSPWDRNHAEYGRPAYLDYFRKQIVE
LCTGYGDLFEFWFDGANGGDGYYGGARETRKIDAPAYYNWPRMIELVHQHQPMACTFDPL
GADIRWVGNEDGVAGDPCWPTMPDAPYTQENGNAGVRGAALWWPAETNTSIRPGWFYHPD
EDGKVRSPENLLRYFDTSVARGTTMNLNLPPDRRGRIADHDVAVLQSFGDAIRASFAIDL
AKGAKASASASRGPGFEPARVLDRQPDSYWSTPDDVITPTLTLELSAVRSFDLIRLREYL
PLGVRVTRFAIEAEVDGQWRRLAEAQCIGAQRILRLDRPVAARRVRLLVLEAPVCPAISE
FALFRAVAPGAVARPRANPPDVLSTSGWRIVEASAPGAEKLLDDDASTVWSVPAPTPGHP
AQVTIDLGALRQVAGFSLTPSRTVLKGAAPPKGYRAESSEDGQHWQSVGAGELANIAYAL
STQRLNFPEVRQVRYLRLSFAETALPAERLAIAGIGAFSRLR
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgtcgtacctttcttgccacgggtgttgtggccgtcgccgcaggtttcagc
gcatccgccgcccagatcgcggctgcgccgcgcccgaaggggccggcgccgtggggcgcg
gtgcccagcgcgcgacagctgcgctggcatcggtgggaacaatacgccttcgtgcacttt
gcgatgaacacctttaccgataaggaatggggttacggcgacgaagatccgcgcaagttc
gatcccagcgatttctctgccgatcaaatcgtcgccgctgccaaggccggcaatctgaaa
gggatcatctttaccgccaagcaccacgacgggttctgcctgtggccgacacgcctgacc
gagcattgcattcgcaattcgccctacaagaacggcaacggcgacatcgtcggcgaaatg
gccgcggcgtgccgacgcgccggtctggccttcggtgtctacctgtcgccctgggatcgc
aaccacgccgagtatggtcgtcccgcatatctcgactatttccgcaagcagatcgtcgag
ctgtgcacgggctatggcgacttgttcgaattctggttcgatggcgccaatggcggcgac
ggctactacggtggcgcgcgcgaaacccgcaagatcgatgcgcccgcgtactacaactgg
ccgcggatgatcgagctggtccaccagcaccagccgatggcctgcaccttcgacccgctc
ggcgccgatatccgctgggtcggcaacgaggacggcgtcgccggcgatccgtgttggccg
accatgcccgatgccccttacacccaggaaaacggcaacgccggcgtgcgtggggcggca
ctgtggtggccggcggaaaccaacacctcgatccgcccgggctggttctaccatcccgat
gaagacggcaaggtgcgcagcccggagaacctgctgcgctatttcgacacctccgtggcg
cgcggcaccaccatgaacctgaatcttccgccggaccggcgcggtcgcatcgccgaccac
gacgtggcggtgctacagagcttcggcgacgcgatccgcgccagcttcgccatcgatctg
gccaagggcgccaaggccagcgccagcgcgtctcgcggtcccgggttcgagcctgcgcgc
gtgctcgaccgccagccggacagctactggtccacgccggacgatgtcatcacgccaacg
ctgacgctggaactgtcggcggttcgcagcttcgacctgatccggctgcgcgaatacctg
ccgctgggcgtgcgcgtcacccgtttcgcgatcgaagccgaggtcgatggccaatggcgg
cggttggccgaagcgcaatgcatcggtgcgcagcggattctgcggctggatcgccctgtc
gccgcgcgccgcgtgcgcctgctcgtgctcgaggcgccggtctgcccggcgatcagcgaa
ttcgcgctgttccgcgccgttgcgccaggtgcggtcgcgcggccgagggcgaacccgccg
gacgtgctttccacctccggttggcgcatcgtcgaggccagcgcgccgggggcggagaag
ttgctcgacgatgatgccagcacggtctggagcgtgcccgcgcccacgcctggccatccc
gcgcaggtgaccatcgacctcggcgcgctgcgtcaagtcgctggcttcagcctcaccccc
tcgcgcacggtgttgaagggcgcggcgccgccgaaaggctatcgcgccgaaagcagcgaa
gatggccagcactggcagtctgtcggcgccggtgagctggccaatatcgcctatgcgctc
tcgacccagcggctgaatttccccgaggtccgccaggtccgctacctgcggctatcgttc
gccgaaaccgcgctgcccgccgagcggctggcgatcgccgggatcggtgcattctcgcgc
ttgcgctga
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