Xanthomonas cerealis: KHA79_19095
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Entry
KHA79_19095 CDS
T10673
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xcs Xanthomonas cerealis
Pathway
xcs03420
Nucleotide excision repair
xcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KHA79_19095 (uvrD)
03430 Mismatch repair
KHA79_19095 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcs03400
]
KHA79_19095 (uvrD)
Enzymes [BR:
xcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHA79_19095 (uvrD)
DNA repair and recombination proteins [BR:
xcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KHA79_19095 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KHA79_19095 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
InPase
Motif
Other DBs
NCBI-ProteinID:
UKE47116
LinkDB
All DBs
Position
complement(4367772..4369973)
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSHLLDDLNPAQREAVSAPSGHYLVLAGAGSGKTRVLTHRIAWLNEVHGVPVHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWPDAKLPESFQVLDSDDQL
RLVKRVVQQLELDEGKFPPKQIVWWINQQKDEGRRAQHIQPEPRDEWTTTLRSAYALYQE
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRSRFSEILVDEFQDTNAIQYAFVRVLAGD
SGRVFVVGDDDQAIYGWRGAKVENVQRFLKDFPNAQTIRLEQNYRSSANILNAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYASYNEIDEARYVVERVRQWVRDGGSYSEAAVLYRSNAQ
SRAFEESLIAEQVPYRVYGGMRFFERAEIKDTLAYLRLVANRADDAAFERAVNTPTRGIG
DRTLDEVRRLARAQSLSLWAAAQQAAQQGGDLAARARNALAQFLGLIEQLSAEVAGLPLP
EQIDQVLARSALREHWSKESRGGLDSESRTDNLDELVSVASRFVRADNDADADEGRQAMT
ELVAFLAYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLVGMEDGLFPSARSLEES
GRLEEERRLAYVGITRARHKLVLSYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQ
VSRNASLGAPRNLGHSAIEAPAIRLGANVQHPKFGGGVVIDYEGNGAHARVQVQFDEVGA
KWLVMAYANLTVL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctcccatttgctcgatgatctgaaccccgcccagcgcgaggccgtctccgct
ccgtccggccattacctggttctggccggcgccggatccggcaagacgcgcgtgctcacc
caccgcatcgcctggctcaacgaagtccacggcgtgccggtgcatggcatcttcgcggtc
accttcaccaacaaggcggccggcgagatgcgccaccgcaccgacctgcaactgcgcaac
ggcagccgcggcatgtggatcggcaccttccacggcctggcgcaccgcctgctgcgcctg
cactggcccgacgccaagctgccggaaagcttccaggtgctggattcggacgaccagctg
cgcctggtcaagcgtgtcgtgcagcagctggaactggacgagggcaagttcccgcccaag
cagatcgtgtggtggatcaaccagcagaaggacgagggccggcgcgcgcagcacatccag
cccgagccgcgcgacgagtggaccaccaccttgcgcagcgcctacgcgctgtaccaggaa
cgctgcgatcgcgccggcctggtcgatttcgccgagctgctgttgcgcgcgcacgaactg
ctgcgcgacaacccggcattgctggcgcattaccgcagccgcttcagcgagatcctggtg
gacgagttccaggacaccaacgcgatccagtacgcgttcgtgcgcgtgctcgccggcgac
agcgggcgcgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctgaaggatttcccgaacgcgcagaccatccgcctg
gaacagaactaccgctccagcgccaatatcctcaatgccgccaacgcggtgatcgcgcac
aaccccgaccgcatcggcaagcagctgtggaccgattcgggcgacggcgatccgatcgat
ctgtacgcgtcctacaacgagatcgacgaagcgcgctacgtggtcgagcgcgtgcgccaa
tgggtgcgcgacggcggcagctacagcgaggcggcagtgctctatcgcagcaacgcgcag
tcgcgcgcgttcgaagaatcgctgatcgccgagcaggtgccgtatcgcgtctacggcggc
atgcgcttcttcgagcgcgccgaaatcaaggacaccctggcctacctgcgcctggtcgcc
aaccgcgccgacgatgcggcgttcgagcgcgcggtgaacacgcccacgcgcggcatcggc
gaccgcaccctggacgaagtgcggcgcctggcgcgcgcgcagtcgctgtcgctatgggcc
gccgcgcaacaggctgcgcagcagggcggcgacctggccgcgcgcgcgcgcaacgcactg
gcgcagttcctggggctgatcgaacaactgtccgccgaagtggccggcctgccgctgccc
gagcagatcgaccaggtgctggcgcgctcggcgctgcgcgagcattggagcaaggaaagc
cgcggcggcctggattcggaatcgcgcaccgacaatctcgacgaactggtctcggtcgcc
tcgcgcttcgtgcgcgccgacaacgacgccgacgccgacgaaggccgccaggcgatgacc
gagctggtcgcgttcctggcttacgcctcgctggaggccggcgaaggccaggcccaggcc
ggcgaagagggcgtgcagctgatgaccctgcattcggccaagggcctggagttcccgctg
gtattcctggtcggcatggaagatggcctgttccccagcgcgcgttcgctggaagagagc
gggcggctggaagaagagcggcgcctggcctacgtcggcatcacccgcgcccgccacaag
ctggtgctgagctacgctgagtcgcggcgcatccacggccaggacaactacaacgtgccc
tcgcgcttcctgcgcgaaatcccgcgtgagctgctgcacgaagtgcggccgaaggtgcag
gtgtcgcgcaacgcctcgctgggcgcgccacgcaacctcggccacagcgccatcgaagcg
ccggcgatccggctcggcgccaacgtgcagcatcccaagttcggtggcggcgtggtcatc
gactacgaaggcaacggcgcgcatgcgcgcgtgcaggtgcagttcgacgaggtcggcgcg
aagtggctggtgatggcgtacgcgaacctgacggtgctctga
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