Xanthomonas citri subsp. citri A306: J151_01389
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Entry
J151_01389 CDS
T03584
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
xct
Xanthomonas citri subsp. citri A306
Pathway
xct03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J151_01389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xct03400
]
J151_01389
DNA repair and recombination proteins [BR:
xct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J151_01389
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J151_01389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_23
AAA_16
RsgA_GTPase
AAA_21
AAA_25
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
NACHT
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AJD67836
LinkDB
All DBs
Position
complement(1422234..1425197)
Genome browser
AA seq
987 aa
AA seq
DB search
MAMDFIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDLDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQP
RCPDHGFPLEAQTVSQMVDHMLAQDQEQRYMLLAPVIRDRKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPPLALRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGEGMVAVQSLD
DPAAAPHLFSSKYSCPVCDYSLPELEPRLFSFNAPVGACPSCDGLGVAEFFDPDRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIASLAKHYKFDVDAVWNTLPAKVRQAVLFGSGDEVISF
TYFTDAGGRTTRKHRFEGILPNLERRYRETESPAVREELTKYVSQQPCPACNGTRLNRAA
RNVFVADRPLPELVVLPVNEALSFFRGLSLPGWRGEIAAKIVKEIGERLGFLVDVGLDYL
TLERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADHVLDIGPGAGVHGGEICAQGTLDDILKSPRSLTGQYLSGKRRI
EIPKQRHKPNPKMMLHLRGATGNNLKNVDLDIPAGLLTCITGVSGSGKSTLINDTLFTLA
ANEINGASHTVAPHREVENLDLFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGMIKVEMHFLPDVYVPCDVCHGKRYNRETLEIR
YKGFNISDVLQMTVEDALRLFEPVPSIARKLETLVDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEALLGVLHKLRDEGNTVVVIEHNLDVIKTAD
WIVDLGPEGGHRGGTILVSGTPEEVAAHKASYTGQFLAKMLPSVKARETRPAAMANKPDA
RPPRKVKPEKVAKAAKSATKKTAKKAS
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggatttcatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgac
ctcgacctgccccgcgacaaactgatcgtgatcaccggcttgtccggctcgggcaagtcg
tcgctggcattcgacaccatctatgcagaaggccagcgccgctacgtcgagtcgctgtcg
gcgtatgcgcgccagttcctcagcgtgatggaaaagccggacctggaccacatcgaaggc
ttgtcgccagcgatttcgatcgaacagaaatccacctcgcataacccgcgctccaccgtc
ggcacgatcaccgagatctacgactacctgcgcctgctgtacgcacgcgtgggccagccg
cgctgccccgaccatggcttcccgctggaagcgcagaccgtcagccagatggtcgaccac
atgctcgcccaggatcaggagcagcgctacatgttgctggccccggtgatccgcgaccgc
aagggcgagcatgcgcaggtgttcgaacagttgcgtgcgcagggcttcgtgcgcgtgcgc
gtggacggcgaactctacgaaatcgatgcggtgccgccgctggcattgcgccagaaacac
accatcgaagcggtgatcgaccgctttcgtccgcgcgaagacatcaagcagcgtcttgcg
gaaagtttcgaaaccgcgctcaagctcggcgaaggcatggtggcggtgcagtcgctggac
gacccggcagccgcgccgcacctgttctcgtccaaatacagctgcccggtgtgcgactac
tcgctgccggagctggaaccgcgactgttttcgttcaacgcaccggtgggcgcctgcccg
agctgcgatggcctgggcgtggccgaattcttcgaccccgatcgcgtggtcgtgcatccc
gaactgtcgctgtcggccggcgcggtgcgcggctgggaccgacgcaatgcctattatttc
cagctgattgcttcgctggccaagcactacaagttcgacgtggatgcggtgtggaatacg
ctgccggccaaggtgcggcaggcggtgctgttcggcagcggcgatgaggtgatcagcttc
acctacttcaccgatgcgggcgggcgcaccacgcgcaagcatcgcttcgagggcatcctg
ccgaacctggaacgccgttaccgcgaaaccgaatcgccggcggtgcgcgaagagctgacc
aagtacgtcagccagcaaccctgccccgcctgcaacggcacgcgcttgaatcgcgctgcg
cgcaacgtgttcgtggccgatcgcccactaccggaattggtggtgcttccggtcaacgag
gcgttgagctttttccgtggcctgtcgctgccgggttggcgcggcgagatcgcggccaag
atcgtcaaggaaatcggcgagcgactgggcttcctggtcgatgtgggtctggattacctc
accctggagcgcaaggccgacaccttgtccggcggtgaggcgcagcgcattcgcctggcc
agccagatcggcgccggcctggtcggggtgatgtacgtgctggacgagccctcgatcggc
ctgcaccaacgcgacaacgaacgcctgctcggcacgctgacgcggttgcgcgatctgggc
aacaccgtgatcgtggtcgagcatgacgaagatgcgatccgcctggccgaccatgtgctg
gacatcggccccggtgcgggcgtgcatggcggcgaaatctgcgcgcaaggcacgctggac
gacatcctgaaatcgccacgctcgttgaccggccaatacctgtcgggcaagcgccgcatc
gagattcccaagcagcgccacaagcccaacccgaagatgatgctgcatctgcgcggggcc
actggcaacaacctgaagaatgtcgacctggatattcccgccggcctgctgacctgcatc
accggcgtgtccggctcgggcaaatcgacgttgatcaacgacacgttgttcaccctggcg
gccaacgagatcaatggcgcctcgcacacggtggcaccgcatcgcgaagtcgagaatctg
gacctgttcgacaaggtggtggatatcgaccagtcgccgatcggacgcacgccccgttcc
aatccggcgacctataccggcatgttcacgcccttgcgcgagctgttcgcgcaggtaccc
gaggcgcgtgcacgcggctattcgccgggccgcttcagcttcaacgtgcgtggcggccgc
tgcgaggcctgccagggcgacggcatgatcaaggtggagatgcacttcctgcccgatgtc
tacgtgccctgcgacgtctgccacggcaagcgctacaaccgcgaaacgctggagatccgc
tacaagggcttcaacatcagcgacgtgctgcagatgaccgtggaagatgcgctgcgcctg
ttcgagccggtgccgtcgatcgcgcgcaagctggaaacgctggtcgatgtgggattgagc
tacatcaagctgggccagagcgcgaccacgctctccggcggcgaggcgcagcgcgtcaag
ctgtccaaggagctgtcgcggcgcgataccgggcgcaccctgtacatcctcgacgagccg
accaccgggctgcacttccacgatatcgaagcgttgctcggcgtgctgcacaagctgcgc
gacgaaggcaacacggtggtggtgatcgaacacaatctggacgtgatcaagaccgccgac
tggatcgtggatctgggcccggaaggcggccatcgtggcggcaccatcctggtctccggt
acgccggaagaagtggctgcacacaaggcgtcctacaccgggcagttcctggccaagatg
ctgccgtcggtgaaggcgcgcgagacgcgtccggcggcaatggccaacaagcctgatgcg
cgtccgccgcgcaaggtcaaaccggagaaggtggccaaggctgccaaatccgccaccaag
aagactgcgaagaaggcaagctga
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