Xanthomonas citri subsp. citri 306: J151_01751
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Entry
J151_01751 CDS
T03584
Name
(GenBank) Exodeoxyribonuclease I subunit C
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xct
Xanthomonas citri subsp. citri 306
Pathway
xct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J151_01751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xct03400
]
J151_01751
Enzymes [BR:
xct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
J151_01751
DNA repair and recombination proteins [BR:
xct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J151_01751
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J151_01751
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J151_01751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
BON_like
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
AJD68194
LinkDB
All DBs
Position
complement(1845613..1847058)
Genome browser
AA seq
481 aa
AA seq
DB search
MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMV
TGITPQHALREGVTEAEAFARIAEQMGRPQTCTLGYNSIRFDDEFIRCGLFRNFYDPYER
EWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDVREGDAHEALSD
VYATIGMARKFQQHQPKLWDYALRLRDKRFAAALLDVIAMQPVLHVSQRYPASRLCAAAV
LPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQRIPLKEVHLNK
SPALVAWQHLRAADFERLGVDHDAVVAKAARLRALGPELAEKVRQVYGSERAAAAAVNDA
DASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFRYRARNWPQTLSFEE
QERWNVYRRQRLLQDRGLGEVTLEQYHAQIADLRGAHPDDATKQALLDQLAAWGSDLQRT
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacagctttctcttctacgacctggaaaccttcggccaggatccacgccgcacc
cgcattgcacagttcgctgcagtgcgcaccgacgcgcaactgcgcgtgatcgaagagccc
atcagctttttcgtgcagccggccgacgatctgctgccctcgccctacgccaccatggtg
accggcatcaccccgcagcacgcgctgcgcgaaggcgtcaccgaggccgaggcgttcgca
cgcatcgccgaacagatgggccgaccgcagacctgcacgctgggctacaactcgatccgc
ttcgacgacgaattcatccgctgcggcctgttccgcaatttctacgacccgtacgagcgc
gagtggcgtggcggcaattcccgctgggatttgctggatgtgctgcgactggtacacgcg
ctgcgcccggacggcatcgtctggccacagcgcgaagatggcgccacctcgttcaagctg
gagcacctggccgatgccaacgatgtgcgcgaaggcgatgcgcacgaagccttgtcggac
gtgtacgccaccatcggcatggcgcgcaaattccagcagcaccagccgaagttgtgggac
tacgcgctgcgcctgcgcgacaagcgctttgcagccgccttgctggatgtcattgcgatg
caaccggtgctgcatgtttcgcagcgttaccccgcctcgcgcctttgcgctgcggcggta
ctgccgctgacgcgccacccgcgcatcgacagccgcgtgatcgtattcgatctggagggc
gacccggaggtgctgttgcggctcagccccgacgatattgcagaccgcctgtatatccgc
gccgcggatttgccggaaggcgaacagcgtatcccgctaaaggaagtgcatctgaacaag
tcgcccgcgctggtagcctggcagcatctgcgcgctgcggatttcgagcgcctgggtgtg
gatcacgacgcggtagtggccaaggcggcacggttgcgcgcattgggccctgaacttgcc
gagaaggtgcgccaggtctacggcagcgaacgcgccgcggccgcggcggtcaacgatgcc
gacgcctcgctctacgatggctttctggccgaaggcgacaaacgcctgcttgcgcaggtc
cgcgccagcgcgccggacgaactgggcgcgctggaagcgcgctttcgcgatccgcgcctg
atcgagctgctgtttcgctaccgcgcgcgcaactggccgcagacactctcgttcgaggaa
caggagcgctggaacgtgtatcgccgccagcgcctgctccaagaccgcggcctgggcgaa
gtcaccctggagcaataccacgcgcagatcgcggatttacggggtgctcaccccgacgat
gctaccaagcaagccctactcgaccagctcgccgcctggggttcggacctccaacgcacg
ctatga
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