Xanthomonas citri subsp. citri A306: J151_02469
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Entry
J151_02469 CDS
T03584
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
xct
Xanthomonas citri subsp. citri A306
Brite
KEGG Orthology (KO) [BR:
xct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xct03032
]
J151_02469
03036 Chromosome and associated proteins [BR:
xct03036
]
J151_02469
03400 DNA repair and recombination proteins [BR:
xct03400
]
J151_02469
DNA replication proteins [BR:
xct03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J151_02469
Chromosome and associated proteins [BR:
xct03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
J151_02469
DNA repair and recombination proteins [BR:
xct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
J151_02469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CDC48_2
HU-CCDC81_euk_2
PTS-HPr
VWA_3
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AJD68892
LinkDB
All DBs
Position
complement(2687485..2687796)
Genome browser
AA seq
103 aa
AA seq
DB search
MTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDVADTAD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgattgaaatcctggcgcgacgccaagcgcatctgaagtcggac
gacgtagatctggcagtcaagtcgctgctggaaatgatggggcaggccctctccgacggt
gatcggatcgaaattcgcgggttcggcagtttttcgctgcattaccgtccgccacggttg
ggacgtaatcccaagaccggcgagtcggtcgcgctgccgggcaagcatgttccccacttc
aagccgggcaaggaattgcgtgagcgcgtgagctccgtggtgcctgtggatgtggccgat
acggcagactga
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