KEGG   Xanthomonas citri subsp. citri A306: J151_02626
Entry
J151_02626        CDS       T03584                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xct  Xanthomonas citri subsp. citri A306
Brite
KEGG Orthology (KO) [BR:xct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xct03400]
    J151_02626
Enzymes [BR:xct01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J151_02626
    5.6.2.6  RNA 3'-5' helicase
     J151_02626
DNA repair and recombination proteins [BR:xct03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    J151_02626
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr Helicase_C WH3_Lhr ResIII Cas3-like_C_2 HTH_9 PhoH Extensin-like_C DUF5805 AAA_25
Other DBs
NCBI-ProteinID: AJD69045
LinkDB
Position
complement(2851471..2855865)
AA seq 1464 aa
MHPVLQHFHPVVAAWFAQTFAAPTPAQIAAWPAIQAGRHTLVAAPTGSGKTLTAFFAAID
ALIRDGLANGGALPDETRVVYVSPLKALSNDIHLNLDAPLQGIRAALVAGGLPDVPIRTA
VRTGDTPQRERAQARRTPPHILVTTPESLYVLLGSASGRTSLRQVRTVIVDEIHAVASDK
RGSHLSLTLERLQRLVAQPITRVGLSATQKPIETVAQFLVGVDADGVPPPCEIVDIGYTR
RRDLALALPPTPLSVVMSNDQWLQVYADVAALAQQHRTTLVFVNTRRMAERAARHLGDLL
GKQRVSAHHGSLSRETRLLAEQRLKAGDLTVLVATASLELGLDIGDVDLVCQLGSPRSIA
TFLQRAGRSGHKVGGTPKARLFPQTRDELVECAALLDSIRRGELDALRIVPAPLDVLAQQ
IVAEAACEDWDEDALFALVRRAWPFAGLSRATFDSVVRMLCDGFSTRLGPRAGYLHRDAV
HRRLHARRGARMTALTSGGTIPETGDYSVVLEPQAEKIGTVNEDFAVESLTGDVFQLGNA
SYRILRVEAGRVRVEDAKGAPPNIPFWLGEAPGRSDELSAAVSRLRGEIAARLDTAPHQA
ARDWLQRELEMSAEAARQLVDYLANACTGLGAMPTQQCLVMERFFDASGGTQLVIHSPYG
SRINRAWGLALRKRFCRTFNFELQAAATEDAIVLSLSTSHSFALEEVGRYLHSSSAEHVL
IQALLDAPLFGVRWRWNATNAMALPRFSGGNKVAPQLQRMKSEDLLATVFPDQVACAENL
VGEREVPDHPLVAQTLEDCLHHAMDSEGWLQVLRGLESGAVTLVARDLAAPSPLAAEALN
ARPYAFLDDAPLEERRTQAVQSRRYTPQTSDDLGQLDPQAIAAVCEEAWPQPRDAEEMHE
ALVGLGVLPVAEATDAQWQAWLAALAAAGRASCIAMHGIPALWISAERIDWFLPLYRQAT
AQPPLQAPADCRVADWQRDWAVRELLRGRLSAVGPAQVPALSNALQVPEPEIVLALAALQ
REGYVMAGRFSAHVQAEEWCERHLLARIHRYTLGRLRREIEPVSQRDYARFLFEWQHVDS
SSRVAGPDALAGVVGQLEGFEAPAVLWESELLPARIRDYQPAWLDELCTAGRTLWARLRP
GSGRGGGALRSTPIVLLPRREAQRWSALARDADDAPLGSRAQRVMQVLQQQGALFFDEIA
DAAHLMNTELEDALSELVMRGRAHCDSYAGLRALLVPASKRPSALSRQRRRASALGIRDA
GRWAPARALPDLPLAEAAQRHQDTLEHLARTLLRRYGVVCWRLLEREAAWLPPWRELLRM
YQRLEARGEIRGGRFIAGLSGEQFALPDAIAALRRVRAQPLPQQWICVSASDPSNLLGSL
LPGERVARVPGNRVVSLDGLPMAVWAADRFQALQELTPEQAEQALRLLQRGPGAAEQSPM
ERLLAQSPASTVPFPVTRGSGRDK
NT seq 4395 nt   +upstreamnt  +downstreamnt
atgcatcctgtcctgcaacacttccatcctgtggtcgctgcatggttcgcgcagaccttc
gctgcgccgacaccggcgcagatcgctgcgtggccggcgatccaggccggacgccacacg
ctggtggccgcgcccaccggctcgggcaagacgctaacggcgttcttcgccgccatcgat
gcgttgatccgcgacgggctggccaatggcggtgcgttgcccgacgaaacccgtgtggtc
tacgtctcgccgttaaaggccttgtccaatgacatccacctcaacctggacgcgcccttg
cagggcatccgtgcggcgctggtcgccggcggcttgccggatgtgccgattcgtaccgcg
gtgcgtaccggcgacaccccgcagcgcgagcgcgcgcaggcgcgtcgcacgccgccgcat
attctggtgaccaccccggagtcgctgtacgtgctgttggggtcggcatccgggcgcacg
tcgctgcggcaggtgcgcaccgtgatcgtcgatgaaatccacgcggtggcgtcggacaag
cgcggcagccacctgagcctgacgctggagcgcttgcagcggctggtcgcgcagccgatc
acgcgggtggggctgtcggcgacgcagaagcccatcgaaacggtggcgcaattcctggtc
ggtgtcgacgcagacggcgtgccgccgccgtgcgagatcgtcgatatcggctacacccgc
aggcgtgatctggccctggcgttgccgcccacgccgctgagcgtggtgatgtccaacgac
cagtggctgcaggtgtatgccgatgtggccgcactggcgcagcaacatcgcaccacgctg
gtgttcgtcaacacgcggcgcatggccgaacgcgcggcgcggcatctgggcgatctgctc
ggcaaacagcgcgtgtcggcgcatcacggcagcctgtcgcgcgagacgcgcctgctggcc
gagcaacggctcaaggccggcgatctcaccgtgttggtggcgaccgcttcgctggaactg
gggctggatatcggcgatgtcgatctggtctgccagctcggttcgccgcgctcgatcgcc
accttcctgcaacgtgccgggcgttccggacacaaggtcggcggtacgcccaaggcgcgc
ctgtttccgcagacccgcgacgaactggtcgaatgcgccgcgctgctggacagcatccgc
cgcggcgaactggatgccttgcgcattgtgccggcgccgctggacgtgctggcgcagcag
atcgttgccgaagccgcatgcgaagactgggacgaagatgcgctgttcgcgctggtgcgg
cgcgcgtggccgttcgccgggttgagccgtgccaccttcgacagcgtggtgcgcatgttg
tgcgatggcttcagcactcggctcggtccgcgcgccggatatctgcatcgcgatgcggtg
catcggcgcttgcacgcacggcgcggtgcgcgcatgacggcgctcacctccggcggcacc
attcccgaaaccggcgactacagcgtggtgctggaaccgcaggccgaaaagatcggcacg
gtgaacgaggatttcgccgtcgaaagccttaccggcgatgtgttccagctcggcaatgcg
agttaccgcatcctgcgcgtggaggccgggcgcgtgcgcgtggaagatgccaagggcgcg
ccgccgaacattccgttctggctgggcgaagcgccgggtcgtagcgatgagctgtctgcg
gcggtgtcgcgcctgcgtggcgagattgccgcgcggctggacaccgcgccgcaccaggcg
gctcgcgactggctgcagcgcgagctggagatgtccgccgaagcggcgcgacaactggtg
gattatctggcaaacgcttgcaccggattgggcgcgatgccgacccagcagtgcctggtc
atggagcgcttcttcgatgccagcggcggtacccagctggtcatccattcgccgtacggc
agccgcatcaatcgtgcgtgggggctggcgctgcgcaagcgcttctgccgcaccttcaat
ttcgaattgcaggctgcagccaccgaagatgcgattgtgctgtcgctgtcgaccagtcat
agctttgcgctggaagaagttggccgttacctgcattcgtcgtcggccgagcatgtgctg
atccaggcattgctggatgcgccgctgttcggcgtgcgctggcgctggaacgccaccaac
gccatggcgctgccgcgcttcagtggcggcaacaaggtggcgccgcagttgcaacgaatg
aagtccgaagatttgctcgccacggtattcccggaccaggtggcctgtgcggaaaatctg
gtcggcgaacgcgaggtgcccgaccacccgttggtggcacagaccctggaagattgcctg
caccacgccatggatagcgaaggctggctgcaggtgttgcgcggcctggaatcgggcgcg
gtgacgctggtcgcgcgcgacctggcggcgccgtcgccgctggccgccgaagccttgaac
gcgcgtccctatgcatttctcgacgatgcgcccctggaagaacgccgtactcaggccgtg
caaagtcggcgctatacgccgcagaccagcgacgacctgggacagctcgatccgcaagcg
attgccgcagtgtgcgaagaagcctggccacagccgcgcgatgccgaagaaatgcacgag
gcactggtggggctgggcgtgttgccggtcgcagaggccaccgatgcgcagtggcaggca
tggttggccgcgctggccgcagctggtcgtgccagctgcattgccatgcatggcatcccg
gcgctgtggatcagcgccgagcgcatcgactggttcttgccgttgtatcggcaagcaact
gcgcagccgccgctgcaggcgccggccgattgccgcgttgccgactggcagcgcgactgg
gcggtgcgcgaactgctgcgcgggcgcttgtccgccgttggcccggcacaggtgccggcc
ttgtccaatgcgttgcaggtgcccgagccagagatcgtgctggcgttggcggccttgcaa
cgcgagggctacgtcatggccgggcggttcagtgcgcacgtgcaggccgaagagtggtgc
gagcgccatctgttggcacgcatccaccgctacacgttggggcgtctgcgccgcgagatc
gaaccggtatcgcagcgcgattacgcgcgttttctgttcgagtggcagcacgtggacagc
agcagccgggtggctgggccggatgcgctggccggcgtggtggggcagctcgaaggcttc
gaggcgcctgcggtgctgtgggagagcgagctattgccggcgcgcatccgcgactatcaa
ccggcctggctggacgagttgtgcaccgccgggcgcacgctgtgggcacgcttgcggccc
ggcagcggccgcggcggcggcgcactgcgcagcacgccgatcgtgctgctgccacggcgc
gaagcgcagcgttggagcgcattggcgcgcgatgccgacgacgcgccattgggctcccgc
gcgcaacgcgtcatgcaggtgctgcagcagcaaggcgcgctgttcttcgatgaaatcgcc
gacgcggcgcatctgatgaacaccgagctggaagatgcattaagcgagctggtgatgcgc
ggccgcgcgcattgcgacagctatgccggtctgcgcgcgctgctggtgccggcgtccaag
cggccgtcggcactgtcgcggcagcgtcgccgcgccagcgcgctgggcatccgcgatgcg
ggtcgctgggcgccggcgcgggcgctgcccgacttgccgcttgccgaagccgcgcagcgc
catcaggacacgctcgaacacctcgcgcgcacgctgttgcggcgctacggcgtggtgtgc
tggcggctgctcgaacgcgaggccgcatggctgccgccgtggcgggaattgctgcgcatg
tatcaacggctggaagcgcgcggcgaaatccgcggcgggcggttcatcgccgggctgtcc
ggcgagcagtttgcgttgccggacgcgattgcggccttgcgccgtgtgcgcgcgcagcca
ttgccgcagcagtggatctgcgtcagtgccagcgacccaagcaatctgctcggcagtctg
ctgccgggcgagcgggtcgcgcgcgtgccgggcaatcgtgtcgtttcgctggatgggctg
cccatggcggtctgggcggcagaccgcttccaggccttgcaggagcttacgcccgagcaa
gccgagcaggcgctgcgtctgctgcagcgcggaccgggcgcggcagaacaatcgccgatg
gagcgcttgttggctcaatcgccggcaagcaccgtgccttttccggtcacgcgcggaagc
ggacgcgataaatag

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