Xanthomonas citri subsp. citri A306: J151_04289
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Entry
J151_04289 CDS
T03584
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xct
Xanthomonas citri subsp. citri A306
Pathway
xct03030
DNA replication
xct03410
Base excision repair
xct03420
Nucleotide excision repair
xct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J151_04289
03410 Base excision repair
J151_04289
03420 Nucleotide excision repair
J151_04289
03440 Homologous recombination
J151_04289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xct03032
]
J151_04289
03400 DNA repair and recombination proteins [BR:
xct03400
]
J151_04289
Enzymes [BR:
xct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J151_04289
DNA replication proteins [BR:
xct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J151_04289
DNA repair and recombination proteins [BR:
xct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J151_04289
NER (nucleotide excision repair)
GGR (global genome repair) factors
J151_04289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Terminase_6
Motif
Other DBs
NCBI-ProteinID:
AJD70685
LinkDB
All DBs
Position
complement(4815114..4817918)
Genome browser
AA seq
934 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGA
ADGLAVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPEQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRTLVTI
KTDVTLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAAQAGLLAEPVALGAAA
ATARTEPGRARGTGFVSGPVNAAVDLDPSLSAPGQYDTILTQEQLDSWIARLRAAGQFAF
DTETDSLDPLQADLIGLSVAAEPGQAAYLPFGHNFPGVPVQLDRTQALAQLAPLLTDPAV
RKLGQHGKYDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYE
DVCGKGAKQIPFAQISLEDATRYAAEDADITLRLHRVLGPRLASEPGLERVYRDIEMPLV
DVLARIEANGVCVDAAELRRQRADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDEL
KLPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGR
VHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIM
AHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLA
RQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQG
QRAGAERAAINAPMQGTAADIIKRAMVKVDGWIADHAQRAKMILQVHDELVFEADIDFVD
TLLSEVTTRMAGAAELRVPLVVDSGVGDNWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgagcccaccggcgccttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggagcgcccggcctacatcgccttcgtggtggatgcgcccggt
aaaaccttccgtgatgacttgtatgccgactacaaggccaaccggccgtcgatgcccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgtatcgacggcgtggaagccgacgatgtgatcggcacgctggcgctgcagggcgcc
gccgatggcctggccgtcaccatctccaccggcgacaaggacttcgcccagctggtgcgc
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggccggagcagatcgtggacctgctggcgctgatgggcgac
accgtcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgatggcgtcatcgccaatgccgacaagatcaagggcaagatc
ggcgacaacttgcgcgccgcgttgccacggctgccgctcaaccgcacgctggtcaccatc
aagaccgatgtcaccctggccagcggcccgcgcgcgctggacctgcgcgagcccaatgcc
gaggcgctggcggtgctgtatgcccgctacggtttcacccaggcgctgcgcgaactgggt
ggtgcggccgctgcccaggcgggcctgctggccgagccggtggcgctgggcgctgctgct
gccactgcgcgcaccgagccgggccgcgcgcgcggcaccggcttcgtctccggccccgtc
aacgcagcggtggatctggatccgtcgctgtcggcgcccggccagtacgacaccatcctg
acccaggagcagctcgacagctggatcgcgcggctgcgtgccgccgggcagttcgccttc
gataccgaaaccgacagcctggacccgctgcaagccgatttgatcggcctgagcgtggcc
gccgagcctggccaggcggcgtacctgccgttcggccacaactttcccggcgtcccggtt
caactcgaccgcacccaggcgttggcgcagctggcgccgctgctcaccgacccggccgtg
cgcaagctcggccagcacggcaagtacgacctgcacgtgatgcgccggcatggcgtggaa
ctggccggctacgccgacgacaccttgctggagagcttcgtgctcaattccggcagcgcc
cgccacgacatggatagcctggccaagcgctatctcggctacgacaccgtcaagtacgaa
gacgtctgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggaagacgcc
acccgctatgccgcagaagacgccgacatcaccttgcgcctgcatcgcgtgctcggcccc
cgcctggccagcgaaccgggcctggagcgcgtctaccgcgacatcgaaatgccgctggtg
gacgtgctggcccgcatcgaggccaacggtgtgtgcgtggatgcggccgaactgcgccgc
cagagagcggacctgtccaagcgcatgctcgccgcccagcagaaagccaccgagctggcc
gggcgcaccttcaacctggattcgcccaagcagctgcaggccctgctgttcgacgagctc
aagctccctgccgtggtcaagacgcccaagggccagccctcgaccaacgaagaggcgctg
gaagccatcgccgaccagcacgagctgccgcgggtcatcctggaataccgtggcctgacc
aagctgcgcagcacctacaccgacaagctgccggagatgatccacccgcagtccgggcgc
gtgcacaccagctaccaccaggccggtgccgccaccgggcggctgtcctcctcggatccg
aacctgcagaacatcccgatccgcaccgaagacggccgccgcattcgccgcgccttcgtc
gcaccgcccggacgcaagctgatcgcctgcgactattcgcagatcgaactgcgcatcatg
gcgcacctgtccggcgaccccgggctggtgggtgcgttcgagtccggcgccgacgtgcat
cgcgccacggccgccgaagtcttcggccgcaccatcgacaccgtcagcgctgacgaacgc
cgcgctgccaaggcgatcaacttcggcctgatgtatggcatgagcgcctttggcctggcc
cgccagctcggtatcggccgcggcgaggcgcaggattacattgcgctgtacttcagccgt
tacccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctat
gtggaaaccgtgttcggccgtcggctgtacctggatttcatcaatgccggcagccagggc
cagcgtgccggtgccgagcgcgccgccatcaacgcgccgatgcagggcaccgctgcggac
atcatcaagcgcgcgatggtcaaggtggatggctggatcgccgaccacgcgcaacgcgcg
aagatgattttgcaggtgcacgacgaactggtgttcgaagccgatatcgatttcgtcgac
acgctgctgagcgaggtcaccacgcgcatggcgggcgctgctgaattacgcgtgccgctg
gtggtcgattcgggcgttggcgataattgggaccaagcgcattga
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