Xanthomonas citri subsp. citri A306: J151_04467
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Entry
J151_04467 CDS
T03584
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xct
Xanthomonas citri subsp. citri A306
Pathway
xct03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J151_04467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xct03400
]
J151_04467
Enzymes [BR:
xct01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
J151_04467
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J151_04467
DNA repair and recombination proteins [BR:
xct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J151_04467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AJD70863
LinkDB
All DBs
Position
complement(5064625..5065440)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTLRGLSPHLVGQRIHGVILRRPDLRWPIPEQIERLLPGATITNVRRRAKYL
LIDTDAGGSVLLHLGMSGSLRVLPGDTLPRAHDHVDISLQSGRLLRFNDPRRFGCLLWQS
GTQAHDLLAALGPEPLSDAFTGDYLHALAQGRRAAVKTFLMDQAVVVGVGNIYAAESLHR
AGISPLREAGKVSLERYRRLADAVKDILAYAIQRGGTTLRDFISPDGAPGYFEQELFVYG
REGEACKQCGRVLKHATIGQRATVWCGSCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttgcccgaggtcgaaacgacgttgcgtggcctgtcgccgcatctggttggg
cagcggatccatggcgtgatcctgcgtcggcccgatctgcgttggccgattcccgagcag
atcgagcgcttgcttcccggcgccaccattaccaacgtgcgccgacgtgcgaaatacttg
ctgatcgatacggatgccggcggcagcgtgctgttgcatctggggatgtccggaagtctg
cgggtgctgcctggcgacacgttgccgcgggcgcacgaccatgtggatatcagtctgcaa
agcgggcgcttgctgcgtttcaacgatccgcgtcgctttggctgcctgttgtggcaatcc
ggcacacaagcccatgacttgctcgctgcgcttggtccagaaccattatcggatgcattt
actggcgattatctccacgcgctggcacaggggcggcgcgctgccgtcaagacctttttg
atggatcaggccgtggttgtcggagttggaaatatctacgctgccgaaagcctgcatcgg
gcgggaatcagtccgttgcgcgaggcggggaaggtctcgctggagcgttatcggcgtctg
gctgatgcagtgaaagacatcctggcgtatgccatccagcgcggtggaaccacattgcgc
gacttcatcagccccgatggtgcgcccggctatttcgagcaggaactttttgtttatggg
cgcgagggcgaggcctgcaaacagtgtggacgggtcttgaaacacgcgacgatcggtcaa
cgcgctacggtgtggtgcgggagctgtcagcgataa
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integrated database retrieval system
