Xanthomonas citri pv. citri UI7: J159_01717
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Entry
J159_01717 CDS
T03733
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
xcu
Xanthomonas citri pv. citri UI7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Reg_prop
Y_Y_Y
Vgb_lyase
DUF5074
Cas10-Cmr2_palm2
MSC
Motif
Other DBs
NCBI-ProteinID:
AJY81697
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All DBs
Position
1814115..1816988
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AA seq
957 aa
AA seq
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MRDYAIDSWSSRNGLPHNSLRDIAQTRDGYLWFATWEGLVRYNGLEFSVIDRSTRPGLPD
NGVGALYVDRDGALWLSDARGNLVRHAADGQWRQWQWQRQGQWPQALIHAMTMDAEGRMW
LLFEGHGLGCLWPDGHFDYSPPHDDAPLQSSFPRMVFDARGRLLIGTFDGLIYREPDGRM
HRAPAAFGFPPGLAWPYRATDGTVWVVAGDQLYRLQGERAELVHRVPGHGHFTAMLQDRR
GDLWLGSENQGLLRIGPYGVEQLPAGRSLPTGRIVSLREDAEGSIWVGANGGLFRLRETL
FSSYSQRDGLSGDYSRAMLEDRDGSLWIAGTAGLDRMLPDGRIVPVPVVTPSGRRLSVLS
LALDRHGDLWVGTYADGVFVLRAGRVLSHYGEAEGIPGGHIRAIVIDDHDAVWLATQRGV
AQLVDGRRAPLAIEGLPASVVTALASVDGALWIGSVDGAAVLRNGKLRQLNLEKLGGARS
VFGFQPIGDAMWIATDRGLYRERNGVLARVGLEQGMPVDTVFQLIDDRRGNAWISSNRGV
LRTELKTLNAVADGHGTLAIERYGEIDGMGNAQANGSSGPSLLRRADGTVWVVTAGGVSR
VDPSRLQRFRERRPPPAVIENVQQDGQPLVWRQRAQLAGGHRLNVSYVGMSFLLPERIEY
RTRLEGLDASWTERGRQRSVEFIGLPPGRYRLHVAARHPGGAWSPHEAVWAFEVLPLWWQ
RQDVRLAAALGTLLLLALLYRVLLHRYKTHNARLAELVRKRTEDLQRQAQRLLQANQEKS
ELLTRLRIKSDVFERQAHEDALTGLPNRRHFDEALARDISRARRSARPLVLAILDIDHFK
RINDHYSHASGDAVLHEVGVLLTAAARASDLPARLGGEEFALLLADTTLDEAQALCLRIR
ALFHARHNWGSVEGLQVTFSAGVAALRDEDTGSSLMQRADHALYEAKSAGRDRICVG
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgattacgccatcgatagctggagttcgcgcaacgggctgccgcacaactccttg
cgcgacatcgcccagacccgcgacgggtatctgtggtttgcaacctgggaaggcctggtg
cgctacaacgggctggaattcagcgtgatcgaccgcagcacgcgccctgggctgcccgat
aacggcgtcggcgcactctacgtagatcgcgatggcgcgctgtggctgagcgatgcacgc
ggcaacctggtccggcatgctgccgatgggcaatggcggcagtggcagtggcagcggcag
gggcagtggccgcaggcgttgatccatgccatgaccatggacgctgaaggccgcatgtgg
ctgttgttcgaagggcatgggctgggctgcctgtggccggatgggcacttcgactattcc
ccgccgcacgatgacgcgccactgcagagcagctttccgcgcatggtgttcgatgcgcgg
gggcgcttgttgatcggcaccttcgatggattgatctaccgcgaaccggatgggcgcatg
caccgcgcgccggctgcattcgggtttccaccggggttggcatggccgtatcgcgcaacg
gacggcacggtgtgggtggttgcgggcgatcagctgtatcgcctgcagggcgagcgcgcc
gagctggtgcatcgggtgccggggcacggccacttcaccgcgatgctgcaggatcgccgc
ggcgatctgtggctgggcagcgaaaaccaggggctgctgcggatcgggccgtacggcgtg
gagcagctgccggccggtcgcagcctgccgaccggacgtatcgtcagcctgcgtgaggac
gcagaaggcagtatctgggtcggcgccaacggcggtctgttccggctgcgcgagaccctg
ttcagcagctacagccagcgcgatggattaagcggcgactacagccgcgccatgttggaa
gaccgcgacggcagtctgtggatcgccggaaccgccggcctggaccggatgctgccggac
gggcgcatcgtgccggtgccggtggtcacaccctccgggcgacgcctttcggtgctcagt
ctggcgctggaccggcacggcgatctttgggtgggcacctatgccgatggcgtcttcgtg
ttgcgcgctgggcgcgtgctgagccattacggcgaggccgagggcattcccggcgggcat
atccgcgcgatcgtgatcgacgaccacgatgcggtgtggctggcaacccagcgtggcgtg
gcgcagctagtggatggcaggcgcgcgccgttggccatcgaaggcctgcctgccagcgtg
gtgaccgcattggccagcgtcgatggtgcgttgtggatcggttcggtcgatggtgcggca
gtgctacgcaacggcaagctgcgccagttgaatctggaaaaactgggcggcgcgcgcagc
gtgttcggttttcagcccatcggcgatgccatgtggatcgcgaccgatcgcggcctgtat
cgcgagcgcaatggcgtgcttgcacgcgtgggtctggagcagggtatgccggtggatacg
gtgttccagctcatcgacgaccggcgtggcaatgcatggatcagcagcaatcgcggtgtg
ctgcgtaccgaacttaagaccctcaatgccgttgccgacgggcacggcacgctcgcgatc
gaacgctatggcgagatcgatggcatgggcaatgcgcaggccaacggcagttccggcccc
agcctgctgcggcgtgccgacggcacggtgtgggtagtgacagctggcggcgtgagcagg
gtcgacccctcacgcctgcagcgctttcgcgaacgtcgcccgccgccggcagtgatcgag
aatgtgcagcaggatggccagccgttggtgtggcgccagcgcgcacaactggctggcggg
catcgcttgaacgtgtcctacgtcggcatgagctttctgctgccggagcgaatcgagtac
cgcacccgactggagggtctggacgctagctggaccgagcgcggccggcagcgcagcgtg
gaattcatcggcctgccgccgggcaggtatcgtctgcacgtggctgcgcgccatccgggc
ggggcatggagcccgcacgaagcggtgtgggcgttcgaggtattgccgctgtggtggcaa
cgccaggatgtgcgcttggccgcggcgctggggacgctcttgttgctggccttgctgtat
cgcgtgttgctgcatcgctacaagacccataacgcgcgcctggccgagctggtgcgcaag
cgcaccgaggacctgcaacggcaggcgcagcgcttgctgcaggccaaccaggaaaagagc
gagctattgacgcgtttgcgtatcaagtccgacgtgttcgagcgtcaggcgcacgaagat
gcgttgaccgggctacccaaccgtcgccatttcgacgaagcgctggcgcgcgatatcagc
cgtgcacggcgcagtgcgcgcccgctggtgctggcgattctggatatcgatcacttcaag
cgcatcaacgaccattattcgcacgccagcggcgatgcggtcctgcacgaggtgggggtg
cttctcacggcggccgcgcgcgcctcggatctgccggcacgcctgggcggcgaagaattc
gcgctgctattggccgacaccacgctggacgaggcacaggcactttgcctgcgcatccgc
gcgctcttccatgcccgtcacaactggggcagcgtcgagggcttgcaggtgaccttcagc
gccggtgttgccgcactgcgcgacgaagacaccggctcgtcgctgatgcagcgcgccgat
cacgccttgtacgaggccaagagcgccgggcgcgaccggatctgtgtgggttag
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