Xanthomonas citri pv. citri UI7: J159_03719
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Entry
J159_03719 CDS
T03733
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xcu
Xanthomonas citri pv. citri UI7
Pathway
xcu00040
Pentose and glucuronate interconversions
xcu01100
Metabolic pathways
xcu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J159_03719
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J159_03719
Enzymes [BR:
xcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J159_03719
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJY83662
UniProt:
A0A0U5FIV8
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Position
complement(4201717..4202850)
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLLTGVAYADAALEVATTGWATQNGGTKGGSKAAAANIYVVKN
AAELKAALSASVGSNGRIIKVSGIIDISEGKPYTKTSDMKTRARLDVPTKTTLIGITSNA
EIREGYFYVKANDVIIRNITIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGASNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDIKKGANFVTVSYSAFKSHEKNNLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNAVYPFSYAHGVGKESK
IFSERNVFEISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNTNIGWTPPYTYNLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcgacggcggccgccgcgtcgctgttcgttgggtcgttgctgctc
accggcgttgcctatgccgatgcggcgttggaggttgcaaccacgggttgggcgacccag
aacggcggcaccaagggcggctccaaagcagctgccgccaatatctacgtcgtcaagaac
gccgccgagttgaaagcagcattgagcgcaagcgtcgggagcaacgggcgcatcatcaag
gtcagcggcatcatcgatatcagcgaaggaaagccttacaccaaaacctcggacatgaag
acgcgcgcgcgtctggacgtgcccaccaagaccacgctgatcggcatcaccagcaacgct
gaaattcgcgaaggctatttttacgtcaaggccaacgacgtcatcatccgcaatatcacc
atcgaaaatccatgggacccggagccggtctgggacccggatgatggcagcgccggcaac
tggaatgcggagtacgacggcctgaccgtggaaggcgccagcaacgtgtgggtggaccat
gtcaccttcaccgatggccgccgtaccgacgatcagaatggcactgcaaatggtcgtccg
aaacagcaccacgatggcgcgatggacatcaagaaaggcgccaatttcgtcaccgtctcg
tactcggccttcaagtcgcacgaaaagaacaacctgatcggctccagcgacagcgcgtcc
agtaccgacagcggcaagctcaaggtcaccattcacaacaccctgttcgaaaacatttct
gcgcgcgccccgcgcgtgcgcttcggtcaggtgcacctgtacaacaactaccacgtcggc
agcaccagcaatgcggtgtatccgttctcctacgcgcatggcgtgggcaaggagtcgaag
atcttctccgagcgcaacgtgttcgagatcagcggtgtcagcagctgcgacaagatcgcc
gccgactacggtggcagcgtgtatcgcgatcagggttcgctgctcaacggcaaggcgctg
tcgtgctcgtggaataccaacatcggctggacaccgccctatacctacaatctgctatcg
gcagacaaggtcgctgcagacgtcaaggcgaaagcaggcgccggcaagctgtaa
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