Xanthomonas citri pv. citri UI7: J159_03860
Help
Entry
J159_03860 CDS
T03733
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xcu
Xanthomonas citri pv. citri UI7
Pathway
xcu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J159_03860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcu03400
]
J159_03860
Enzymes [BR:
xcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J159_03860
DNA repair and recombination proteins [BR:
xcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J159_03860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Motif
Other DBs
NCBI-ProteinID:
AJY83803
UniProt:
A0A8I0HGK2
LinkDB
All DBs
Position
complement(4355134..4356570)
Genome browser
AA seq
478 aa
AA seq
DB search
MFSAEVEPAWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLAMPAVVPPPRV
SADFMQLAASVLCHRDPQRHAVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDT
HKMKAFVRFRRLPGEEEDFMSWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGQ
ALTFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
ELIRDAGMRVREMAERAPEPVRRRVPAAPAPLPEAATQSLAQLRTAARDCRRCELWQPAT
QTVFGEGSDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDRETFYVTNAVK
HFRFEQRGKRRLHRNPERTHVQACSGWLQAERAHLRPAQIVCLGATAAQAVLGSRFRLMQ
QRGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRQLLDPPPPSSDQSR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgccgaggtggaacccgcgtggagttttgaagcatggcgtgcgttggcgcgg
gcaggctggtgcgcgcaggtggagccggacgatgtggcctggaatggcggggcgcagggc
ggcttgttgatggggcagggactgttggcgatgccggccgtggtgccaccaccgcgggtc
tctgcggatttcatgcaactggcggcctcggtgctgtgtcaccgcgacccgcaacggcac
gccgtgttgtatcgcttgctgtggcgggttgcctctggggaaaaagccctgctggaacgc
gccaccgatgtggatgtgcaccggctacggcaatggcaaaaagcggtgcagcgcgatacc
cacaaaatgaaggccttcgtgcgctttcgtcgcctgcccggggaagaagaagacttcatg
tcctggttcgagcccgagcactggatcgtggatcgcgtggcgccgttttttgcgcgccgg
tttgccggcatgcgttgggcgatcctgaccccgtaccgcagtgtgcgttgggatgggcag
gcgttgaccttcggcgaaggtgcggtgcgcacccaggtacccgccgacgatgcgcaggag
acgctctggcgcacgtactacgcgcatatcttcaacccggcgcggctcaacccgaccatg
atgcggcaggaaatgccgcagaaatactggaagaacttgcccgaagccacgctgttgccg
gagctgatccgcgatgccggcatgcgtgttcgcgagatggccgagcgcgcgcccgagccg
gtacggcgacgggtgccggcagcgcctgcgccattgccggaagcggcaacccaaagcctg
gcgcagttgcgcactgccgcacgcgattgccggcgttgcgaactgtggcagccggcaacg
caaacggtgttcggcgaaggatccgacgatgcgtcggtcatggtgatcggcgagcagccg
ggcgatgaagaggacttgagcggtcgtccgtttgtcgggcccgccgggcgcctgttcaac
atggcgttaggcgagctgggtgtggaccgcgagacgttctacgtcaccaatgcggtcaag
cattttcgtttcgagcaacgcggcaaacggcggctgcatcgcaatccggagcgcacccat
gtgcaggcctgcagcgggtggttgcaggccgaacgggcgcacttgcgtccggcgcagatc
gtctgcctgggcgcgactgcggcgcaagccgtgttgggaagccgcttccgattgatgcag
caacgcgggcaatggcagcgcctggacgacggcacgcctgtattgaccacggtgcacccg
tcctgggtattgcgccagccatcgacggatgcgcgcgaagaagggtatcgcggatttgtc
gaggatctccgtcagttgctggatccaccgccgccgtccagcgatcagtcgagatag
DBGET
integrated database retrieval system
