Xanthomonas citri pv. citri UI7: J159_03981
Help
Entry
J159_03981 CDS
T03733
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
xcu
Xanthomonas citri pv. citri UI7
Pathway
xcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J159_03981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcu03021
]
J159_03981
03019 Messenger RNA biogenesis [BR:
xcu03019
]
J159_03981
Transcription machinery [BR:
xcu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
J159_03981
Messenger RNA biogenesis [BR:
xcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J159_03981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
S1CSD-TOTE-2
AAA
Spore_III_AA
OB_RNB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJY83923
UniProt:
A0A0U5FMJ8
LinkDB
All DBs
Position
4480515..4482413
Genome browser
AA seq
632 aa
AA seq
DB search
MSDHPSSDTGSSVDAPVEKRVRKPRVSKTAAATEEAGAQQPNLPLPASPAPEAPRAAQAP
SRAADPAPAQTSSDGAQAGQAPSAGHGSDTHGEPREGGQSQQQRFNQAQQQQNQNQGQNQ
GQGQGQQQGQNQNQNQNQNAGQHQQGQGGQGQGQGQNQQGQNQQGNRRDRFRNRRDRGPR
DRFGNDGGMPSSDGSNEPFIARPHPAVPEGFPVYSLSDLKRMPAQKLLDIADQLNIQEGV
ARARKQDVIFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQI
RRFNLRTGDHLSGRIRFPKDGERYFALSIVDTINGEPLEASKNKVLFENLTPLFPRRRFR
LERGDGSTEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQVATAITTNHPEVHMIV
LLIDERPEEVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDS
ITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSK
MDEVIYEEFKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKL
LHPMDEIAAMEFLLDKMKTTKSNDEFFSSMKR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatcatccttcctccgataccgggagcagcgtcgacgctcccgtcgagaagcgc
gtgcgcaagccgcgcgtgagcaagaccgccgccgccactgaagaggctggcgcacagcag
cccaacctgcccttgcccgccagtcccgcacccgaagcaccccgtgccgcgcaggcaccg
tcgcgcgctgccgatccggcaccggcgcagacgtccagcgatggcgcccaggccggtcag
gcgcccagcgccggccacggcagcgacacccacggcgagccccgcgagggcggccagtcg
cagcagcagcgcttcaatcaggcgcagcaacagcagaaccagaatcaaggccagaaccag
ggccaaggccaaggtcagcagcagggccagaaccagaaccagaaccagaaccaaaacgcc
ggccagcatcagcaaggccagggcggtcagggtcagggtcagggtcaaaaccagcaaggc
cagaaccagcagggcaaccgccgtgaccggttccgcaaccgccgcgatcgcggcccgcgc
gaccgcttcggcaacgacggcggcatgccctcgtccgacggcagcaacgaaccgttcatc
gcgcgtccgcatccggccgtgccggaaggttttccggtgtattcgctgagcgacctcaag
cggatgccggcgcagaagctgctggatatcgccgaccagctcaatattcaggaaggcgtg
gcgcgtgcgcgcaagcaggacgtgatcttcgccctgctcaaggtgctgacccgtcatggt
gaaggcgttgccgccgacggcgtgctggaaatcctgcccgacggcttcggtttcctgcgt
gcggcagaagccagctacctggccggcccggacgatacctatatttcgcccagccagatc
cgccgcttcaacctgcgtaccggcgaccacctctccggccgcatccgcttcccgaaggac
ggcgaacgctatttcgcgctgtcgatcgtcgacaccatcaatggcgagccgctggaagcg
agcaagaacaaggtcctgttcgagaacctgaccccgctgttcccgcgccgccgcttccgt
ctggagcgtggcgatggctccaccgaggacatcaccggccgcatcctggatctgatggca
ccgcagggcaagggtcagcgtgcgctgatcgtctccccgcccaaggccggtaagacgatg
atgatgcagcaggtggccacggccatcaccaccaatcatcccgaagtgcacatgatcgtg
ctgctcatcgacgagcgcccggaagaagtgaccgaaatgcagcgcaccgtgcgcggcgaa
gtcatctcctccacgttcgacgagccggctgcgcgtcacgtgcaggtcgccgagatggtg
atcgagcgggccaagcgcctggtcgagcacaagaaggacgtggtgatcctgctggactcc
atcacccgcctggcgcgcgcctacaacaacgtagtgcccagctccggcaaggtgctcacc
ggcggtgtggatgccaatgcgttgcaccgcccgaagcgcttcttcggcgcggcgcgtaac
gtggaagaaggcggctcgctgaccatcatcgccacggcgctggtggaaaccggcagcaag
atggacgaggtgatctacgaagagttcaagggcaccggcaacagcgaagtgcatctgaac
cgtcgcatcaccgaaaagcgcgtgtacccggcaatcgacatcaaccgttcgggcacgcgt
cgcgaagatctgctgatcgagccggagttgctgcagaagatctggatcctgcgcaagctg
ctgcacccgatggacgaaatcgcagcaatggaattcctgttggacaagatgaagaccacc
aagtccaacgacgagttcttcagttcgatgaagcgctga
DBGET
integrated database retrieval system
