Xanthomonas citri pv. citri UI7: J159_04238
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Entry
J159_04238 CDS
T03733
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xcu
Xanthomonas citri pv. citri UI7
Pathway
xcu03030
DNA replication
xcu03410
Base excision repair
xcu03420
Nucleotide excision repair
xcu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J159_04238
03410 Base excision repair
J159_04238
03420 Nucleotide excision repair
J159_04238
03440 Homologous recombination
J159_04238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcu03032
]
J159_04238
03400 DNA repair and recombination proteins [BR:
xcu03400
]
J159_04238
Enzymes [BR:
xcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J159_04238
DNA replication proteins [BR:
xcu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J159_04238
DNA repair and recombination proteins [BR:
xcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J159_04238
NER (nucleotide excision repair)
GGR (global genome repair) factors
J159_04238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Terminase_6
Motif
Other DBs
NCBI-ProteinID:
AJY84171
UniProt:
A0A0U5FMQ3
LinkDB
All DBs
Position
complement(4763330..4766134)
Genome browser
AA seq
934 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGA
ADGLAVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPEQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRTLVTI
KTDVTLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAAQAGLLAEPVALGAAA
ATARTEPGRARGTGFVSGPVNAAVDLDPSLSAPGQYDTILTQEQLDSWIARLRAAGQFAF
DTETDSLDPLQADLIGLSVAAEPGQAAYLPFGHNFPGVPVQLDRTQALAQLAPLLTDPAV
RKLGQHGKYDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYE
DVCGKGAKQIPFAQISLEDATRYAAEDADITLRLHRVLGPRLASEPGLERVYRDIEMPLV
DVLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDEL
KLPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGR
VHTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIM
AHLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSADERRAAKAINFGLMYGMSAFGLA
RQLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQG
QRAGAERAAINAPMQGTAADIIKRAMVKVDGWIADHAQRAKMILQVHDELVFEADIDFVD
TLLSEVTTRMAGAAELRVPLVVDSGVGDNWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgagcccaccggcgccttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggagcgcccggcctacatcgccttcgtggtggatgcgcccggt
aaaaccttccgtgatgacttgtatgccgactacaaggccaaccggccgtcgatgcccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgtatcgacggcgtggaagccgacgatgtgatcggcacgctggcgctgcagggcgcc
gccgatggcctggccgtcaccatctccaccggcgacaaggacttcgcccagctggtgcgc
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggccggagcagatcgtggacctgctggcgctgatgggcgac
accgtcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgatggcgtcatcgccaatgccgacaagatcaagggcaagatc
ggcgacaacttgcgcgccgcgttgccacggctgccgctcaaccgcacgctggtcaccatc
aagaccgatgtcaccctggccagcggcccgcgcgcgctggacctgcgcgagcccaatgcc
gaggcgctggcggtgctgtatgcccgctacggtttcacccaggcgctgcgcgaactgggt
ggtgcggccgctgcccaggcgggcctgctggccgagccggtggcgctgggcgctgctgct
gccactgcgcgcaccgagccgggccgcgcgcgcggcaccggcttcgtctccggccccgtc
aacgcagcggtggatctggatccgtcgctgtcggcgcccggccagtacgacaccatcctg
acccaggagcagctcgacagctggatcgcgcggctgcgtgccgccgggcagttcgccttc
gataccgaaaccgacagcctggacccgctgcaagccgatttgatcggcctgagcgtggcc
gccgagcctggccaggcggcgtacctgccgttcggccacaactttcccggcgtcccggtt
caactcgaccgcacccaggcgttggcgcagctggcgccgctgctcaccgacccggccgtg
cgcaagctcggccagcacggcaagtacgacctgcacgtgatgcgccggcatggcgtggaa
ctggccggctacgccgacgacaccttgctggagagcttcgtgctcaattccggcagcgcc
cgccacgacatggatagcctggccaagcgctatctcggctacgacaccgtcaagtacgaa
gacgtctgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggaagacgcc
acccgctatgccgcagaagacgccgacatcaccttgcgcctgcatcgcgtgctcggcccc
cgcctggccagcgaaccgggcctggagcgcgtctaccgcgacatcgaaatgccgctggtg
gacgtgctggcccgcatcgaggccaacggtgtgtgcgtggatgcggccgaactgcgccgc
cagagcgcggacctgtccaagcgcatgctcgccgcccagcagaaagccaccgagctggcc
gggcgcaccttcaacctggattcgcccaagcagctgcaggccctgctgttcgacgagctc
aagctccctgccgtggtcaagacgcccaagggccagccctcgaccaacgaagaggcgctg
gaagccatcgccgaccagcacgagctgccgcgggtcatcctggaataccgtggcctgacc
aagctgcgcagcacctacaccgacaagctgccggagatgatccacccgcagtccgggcgc
gtgcacaccagctaccaccaggccggtgccgccaccgggcggctgtcctcctcggatccg
aacctgcagaacatcccgatccgcaccgaagacggccgccgcattcgccgcgccttcgtc
gcaccgcccggacgcaagctgatcgcctgcgactattcgcagatcgaactgcgcatcatg
gcgcacctgtccggcgaccccgggctggtgggtgcgttcgagtccggcgccgacgtgcat
cgcgccacggccgccgaagtcttcggccgcaccatcgacaccgtcagcgctgacgaacgc
cgcgctgccaaggcgatcaacttcggcctgatgtatggcatgagcgcctttggcctggcc
cgccagctcggtatcggccgcggcgaggcgcaggattacattgcgctgtacttcagccgt
tacccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctat
gtggaaaccgtgttcggccgtcggctgtacctggatttcatcaatgccggcagccagggc
cagcgtgccggtgccgagcgcgccgccatcaacgcgccgatgcagggcaccgctgcggac
atcatcaagcgcgcgatggtcaaggtggatggctggatcgccgaccacgcgcaacgcgcg
aagatgattttgcaggtgcacgacgaactggtgttcgaagccgatatcgatttcgtcgac
acgctgctgagcgaggtcaccacgcgcatggcgggcgctgctgaattacgcgtgccgctg
gtggtcgattcgggcgttggcgataattgggaccaagcgcattga
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