Xanthomonas campestris pv. vesicatoria: XCV0556
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Entry
XCV0556 CDS
T00288
Name
(GenBank) putative transcriptional regulator, Fis family
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
xcv
Xanthomonas campestris pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcv03000
]
XCV0556
03036 Chromosome and associated proteins [BR:
xcv03036
]
XCV0556
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV0556
Transcription factors [BR:
xcv03000
]
Prokaryotic type
Helix-turn-helix
Other families
XCV0556
Chromosome and associated proteins [BR:
xcv03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
XCV0556
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
XCV0556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_30
Phage_NinH
BrkDBD
HTH_29
HTH_28
HTH_23
Xre-like-HTH
ZNHIT3_C
UPF0175
HTH_17
Motif
Other DBs
NCBI-ProteinID:
CAJ22187
UniProt:
Q3BY76
LinkDB
All DBs
Position
complement(624283..624555)
Genome browser
AA seq
90 aa
AA seq
DB search
MNAAPSRPDTSRGAPKSPLREHVAQSVRRYLRDLDGSDADDVYEIVLREMEIPLFVEVLN
HCEGNQSRAAAMLGIHRATLRKKLKEYGLT
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgcagccccctctcgtcctgacaccagtcgtggcgccccgaagtcgcccctgcgc
gaacacgtggcccagtccgttcgccgttatctgcgcgacctggacggcagcgacgcggac
gacgtttacgaaatcgtgctgcgcgagatggagatcccgctgttcgtcgaagtgctcaac
cactgcgaaggcaaccagagccgcgccgcggcgatgctgggcattcaccgggcaaccttg
cgcaagaagctcaaagagtacgggctgacgtag
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