Xanthomonas euvesicatoria pv. vesicatoria: XCV0689
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Entry
XCV0689 CDS
T00288
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv00300
Lysine biosynthesis
xcv00470
D-Amino acid metabolism
xcv01100
Metabolic pathways
xcv01110
Biosynthesis of secondary metabolites
xcv01120
Microbial metabolism in diverse environments
xcv01230
Biosynthesis of amino acids
Module
xcv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XCV0689 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XCV0689 (dapF)
Enzymes [BR:
xcv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XCV0689 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAJ22320
UniProt:
Q3BXU3
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All DBs
Position
782819..783673
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AA seq
284 aa
AA seq
DB search
MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAP
RSEGAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPMSAHAVERLDG
DRYAVAMGVPQFEPAQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAA
PVERVGALLQQNAAFPDSVNVGFVQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQ
RGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDGEWNR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacggtcgcagcgggcgtctgcgtttcaccaaaatgcatggcgccggcaac
gacttcgtggtgctggacctgcgcgacggtacgccgccaccggatgccgcactggcggcg
cagctggccgaccgccacttcggggtgggctgcgatcagatcctgaccatcgaggcaccg
cgcagcgaaggtgcggtggctgcctacggcatctggaattccgatggctcggccgcgcgc
caatgcggcaacggcgcacgctgtgtcgccgcctggctggtgcgcgacggcacggcccag
ggcgagcgcttcatcatcgacagcccaatgtccgcgcacgcggtcgagcgcctcgacggc
gaccgctacgcggtggcgatgggtgtcccgcagttcgagcccgcccagattccgctggcc
gggtttgcgcatgcgcgcgacgaatatgcgctgccggtgcacggcgagaccgtgcgcttt
ggcgcggtgtcgatgggcaacccgcacgcggtggtcgaagtcggtcgcgtcgatgcagca
ccggtggaacgcgtaggcgcgctgctgcagcagaacgcggcgtttcccgattcggtcaat
gtgggtttcgtgcaggtggtcgaccccgcgcatgtgcgcctgcgcgtgttcgagcgcggg
gtgggcgaaacgctggcctgtgggagtggcgcctgtgcggccgcggtggtgttgatgcaa
cgcggccgtgtcgagcgcgatgtgcaggtgtccttgcccggtggcgagttacgcattcgt
tggcccggcgaccaggagcaggtggtcatgtccggcccggcggtgttcgtcttcgatgga
gaatggaaccgatga
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