Xanthomonas euvesicatoria pv. vesicatoria: XCV1023
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Entry
XCV1023 CDS
T00288
Symbol
rpoA
Name
(GenBank) DNA directed RNA polymerase (alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XCV1023 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xcv03021
]
XCV1023 (rpoA)
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV1023 (rpoA)
Enzymes [BR:
xcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XCV1023 (rpoA)
Transcription machinery [BR:
xcv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XCV1023 (rpoA)
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XCV1023 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
CAJ22654
UniProt:
Q3BWV9
LinkDB
All DBs
Position
1148113..1149111
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATLSLSKQGPGTVTAADIRTDHN
VEIINGDHVICHLTKDTALNMRLKIERGFGYQPAAARRRPDEETRTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtggtccgcagatcgaacgtcttacc
gacaaccgcgccaaggtcgtgatcgaacccttggagcgcggttacgggcacacgctgggc
aatgccctgcgtcgtgtgttgttgtcgtcgatccccggttttgcgatcaccgaggtcgag
atcgacggcgtgctgcatgagtacaccacggtggaaggtttgcaggaagacgtgcttgac
gtcctgctgaacctgaaagacgtggcgattcgtatgcacagtggcgacagcgccacgctg
tcgttgtccaagcagggtccgggtacggtcactgcggcagacatcaggaccgatcacaac
gttgagatcatcaacggcgaccacgtgatctgccacctgaccaaagacaccgcattgaac
atgcgcctgaagatcgagcgtggctttggctaccagccggctgctgcgcgtcgtcgcccg
gatgaagagacccgcaccatcggtcgtctgatgctggatgcgtcgttctcgccggtgcgt
cgcgttgcctacgccgtggaagctgcgcgcgtcgaacagcgtaccgacctcgacaagctg
gtcatcgatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgatcagctgtcggtgttcggcgatttcacccaccgcgatcgcggtgcg
gccaagccggctgccagcggcgtggatccggtgctgctgcgcccgatcgacgaccttgag
ctgaccgtgcgttcggccaactgcctcaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtcgagctgctcaagaccccgaatctgggcaagaagtcgctgaca
gaaatcaaggaagtgctggcacagcgcggccttgcgctgggcatgaagctggagaactgg
ccgccggccggtgtcgcccagcacggcatgcttggttaa
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