Xanthomonas euvesicatoria pv. vesicatoria: XCV1640
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Entry
XCV1640 CDS
T00288
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XCV1640 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV1640 (sbcB)
Enzymes [BR:
xcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
XCV1640 (sbcB)
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
XCV1640 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XCV1640 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XCV1640 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CAJ23314
UniProt:
Q3BV42
LinkDB
All DBs
Position
complement(1851452..1852897)
Genome browser
AA seq
481 aa
AA seq
DB search
MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMV
TGITPQHALREGVTEAEAFARIAEQMGRPQTCTLGYNSIRFDDEFIRCGLFRNFYDPYER
EWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDVREGDAHEALSD
VYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQRYPASRLCAAAV
LPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQRIPLKEVHLNK
SPALVAWQHLRAADFQRLGVDHDAVVAKAARLRALGPELAEKVRQVYGSERAAVAAVNDA
DASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFRYRARNWPQTLSFEE
QERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRRTHSDDATKQALLDQLAAWGSDLQRT
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacagctttctcttctacgacctggaaaccttcggccaggatccacgccgcacc
cgcatcgcacagttcgctgcggtgcgcaccgatgcgcagttgcgcgtgatcgaagagccc
atcagctttttcgtgcagccggccgatgatctgctgccctcgccctatgccaccatggtg
accggcatcaccccgcaacatgcgctgcgcgaaggcgtcaccgaagcagaggcgttcgcg
cgcatcgccgaacaaatgggccggccccagacctgcacgctgggctacaactcgatccgc
ttcgacgacgaattcatccgctgcggcctgttccgcaatttctacgacccgtacgagcgc
gagtggcgtggcggtaactcgcgctgggacctgctggatgtgctgcgactggtccatgcg
ctgcgcccggacggcatcgtctggccgcagcgcgaagatggcgctacctcgttcaagctg
gagcacctggccgatgccaacgatgtgcgcgaaggcgatgcgcacgaagccttgtcggac
gtgtacgccaccatcggcatggcgcgcaaattccagcagcaccagccaaagttgtgggac
tacgcgctgcgcctgcgcgacaagcgctttgccgccaccttgctggatgtcatcgccatg
cagccggtgctgcatatctcccagcgctaccccgcctcgcgcctgtgcgccgcggcggtg
ttgccgctgacgcgccacccgcgcatcgacagccgcgtgatcgtgttcgatctggagggc
gacccggaggtgttgttgcggctgagccccgacgatattgccgaccgcctgtacatccgc
gccgcggatctgccggaaggcgaacagcgcattccgttgaaggaagtgcatctgaacaag
tcgcccgcgctggtggcctggcagcatctgcgcgctgcagattttcagcgcttgggtgtg
gatcacgacgcggtagtggccaaggcggcacgcttgcgcgccttgggccctgaacttgcc
gagaaggtgcgccaggtctacggcagcgaacgcgccgcggtagcggcggtcaacgatgcc
gatgcctcgctctacgatggatttctggccgaaggcgacaaacgcctgcttgcacaggtc
cgcgccagcgcgccggacgaactgggcgcgctggaagcgcgctttcgcgacccgcgcctg
atcgagctgctgtttcgctaccgcgcgcgcaactggccgcagacactctcgttcgaggaa
caggagcgctggaacgtgtatcgccgccagcgcctgctcgaagaccgcggcctgggtgaa
gtcaccctggagcaataccacgcgcagattgcggatttacggcgtactcactccgacgat
gctaccaagcaagccctactcgatcagctcgccgcctggggttcggacctccaacgcacg
ctatga
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