Xanthomonas euvesicatoria pv. vesicatoria: XCV1921
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Entry
XCV1921 CDS
T00288
Symbol
rpfB
Name
(GenBank) long-chain-fatty-acid-CoA-ligase RpfB
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv00061
Fatty acid biosynthesis
xcv00071
Fatty acid degradation
xcv01100
Metabolic pathways
xcv01212
Fatty acid metabolism
xcv02024
Quorum sensing
xcv04146
Peroxisome
Module
xcv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XCV1921 (rpfB)
00071 Fatty acid degradation
XCV1921 (rpfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XCV1921 (rpfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
XCV1921 (rpfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xcv01004
]
XCV1921 (rpfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcv04147
]
XCV1921 (rpfB)
Enzymes [BR:
xcv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XCV1921 (rpfB)
Lipid biosynthesis proteins [BR:
xcv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XCV1921 (rpfB)
Exosome [BR:
xcv04147
]
Exosomal proteins
Exosomal proteins of breast milk
XCV1921 (rpfB)
Exosomal proteins of breast cancer cells
XCV1921 (rpfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
CAJ23598
UniProt:
Q3BUB1
LinkDB
All DBs
Position
complement(2172007..2173689)
Genome browser
AA seq
560 aa
AA seq
DB search
MNQARPWLQSYPAGVAAEIDLEQFRTVAEVFATSVKRFADRPAYHSFGKTITYREADQLV
EQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLI
DSGASVLVVIDNFGTTVQQVIADTPVRQVITTGLGDMLGFPKAALLNFVVKYVKKLVPDY
RINGAIRFREALALGRKHRVPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
HQWLAGTGKLEEGHEVVITALPLYHIFALTTNGLVFMKIGGCNHLISNPRDMPGFVKELK
KTRFTAFTGVNTLFNGLLNTPGFDQVDFSSLKMTLGGGMAVQRSVAERWKKVTGLTLVEA
YGLTETSPAACINPMDLKDYNGSIGLPIPSTDACIKDDAGAELPVGEIGELCIRGPQVMK
GYWKKPDETAKVMDAQGWLHTGDIARMDAQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA
EMPGVLEVAAVGVPDDKSGEIVKAVIVKKDPALTADDVKAHCRANLTGYKQPRVIEFRKE
LPKTNVGKILRRELRDAPKT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggcacgtccttggttgcaaagttatccggccggcgttgccgccgaaatcgat
cttgagcagttccgcacggtggccgaggtgtttgccacctccgtgaaacgcttcgccgac
cggcctgcgtaccatagcttcggcaagaccatcacctaccgcgaggcggatcagctggtc
gagcaattcgccgcctacctgcttggcgagctgcagttgaagaaaggcgaccgcgtcgcc
ttgatgatgcccaactgcctgcaataccccatcgcgaccttcggcgtgctgcgtgccggc
ctgaccgtggtcaacgtcaatccgctgtacaccccgcgcgaactcaagcatcagttgatc
gactccggcgccagcgtgctggtggtcatcgacaacttcggcaccaccgtgcagcaggtc
atcgccgacacgccggtcaggcaagtcatcaccaccggcctgggcgacatgctgggcttc
ccgaaggcggcactgctcaacttcgtggtcaagtacgtcaagaagctggtgcccgattac
cgcatcaacggcgcgattcgcttccgcgaggcgctggcgctgggccgcaagcaccgcgtg
ccgacgctgcagatcgaacccgacgacatcgctttcctgcagtacaccggcggcaccacc
ggcgtggccaagggcgcaatgctgacccaccgcaatctggtcgccaacatgcagcaggcg
caccagtggctggcgggtaccggcaagctggaagaaggccacgaagtggtgatcaccgcg
ctgccgctgtaccacatcttcgcattgaccacgaacggcctggtcttcatgaagatcggc
ggctgcaaccacctgatcagcaacccgcgcgacatgccaggcttcgtcaaggagctgaaa
aagacccgcttcaccgcgttcaccggcgtcaacacgctgttcaacgggctgctcaatacg
cccggattcgatcaggtggatttctcctcgctcaagatgacccttggcggcggcatggcc
gtccagcgttcggtcgccgagcgttggaagaaagtcaccggcctgaccctggtcgaagcc
tacggcctgactgaaacctcgccggccgcgtgcatcaacccgatggacctgaaggactac
aacggttcgatcggcctgccgattccgtccaccgatgcctgcatcaaggacgacgccggc
gcggaactgcccgtgggcgagatcggcgagctgtgcatcaggggcccgcaggtcatgaag
ggctactggaagaaacccgatgaaaccgccaaggtcatggatgcccaaggctggctgcat
accggcgacatcgcgcgcatggacgcacagggcttcgtctacatcgtcgatcgcaagaag
gacatgatcctggtgtccggcttcaacgtgtaccccaacgagatcgaggacgtgatcgcc
gaaatgcccggcgtgctggaagtggccgccgtgggcgtgccggatgacaagtccggcgag
atcgtcaaggcggtcatcgtgaagaaggacccggccctgacggccgatgatgtgaaggcg
cattgccgcgctaacctcaccggctacaagcagccgcgggtgatcgaattccgcaaggag
ttgcccaagaccaacgtcggcaagatcctgcgccgcgaattacgggacgcgccgaagacg
taa
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