Xanthomonas campestris pv. vesicatoria: XCV2081
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Entry
XCV2081 CDS
T00288
Symbol
xthA1
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
xcv
Xanthomonas campestris pv. vesicatoria
Pathway
xcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XCV2081 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV2081 (xthA1)
Enzymes [BR:
xcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
XCV2081 (xthA1)
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
XCV2081 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
CAJ23758
UniProt:
Q3BTV1
LinkDB
All DBs
Position
2373265..2374260
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AA seq
331 aa
AA seq
DB search
MSGTLRKIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQAAFPEQAIRDAGYGVI
WQGEKSWNGVALLARGTEPVEIRRGLPWDPRDTQSRYLEAAIHGVVVACLYLPNGNPQPG
PKFDYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRE
AYQTLLAQGWTDSLLAIHGHTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPDLQDAGV
DKWVRALEKASDHAPTWISVRVPDAPAEAAADATSAAKVRKPGTAKKAAVPKAAAKKTPS
VIAKRAAKKIAAKRATAASAKPHKSAKRTAD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaccttacgtaagatcgcgacgttcaacgtcaacggtattgccagccgtctg
ccacacttgctggaatggctgcagcgcgagcagccggacatcgtgggcctgcaggaattg
aaatcgacgcaagctgcgtttccggagcaggcaatccgcgatgccgggtacggtgtgatc
tggcagggcgaaaagtcctggaatggcgtggcgctgctcgcgcgggggaccgagccagtg
gagattcgtcgcgggttgccctgggatccacgcgatacgcaaagccgctatctggaggcg
gcgatccatggtgtggtggtggcctgcctgtatttgcccaacggcaacccgcagcccggg
ccgaagttcgactacaagcttgcatggttcgaacgcttgatccggcatgcgaaaacgctg
gtggacctgccgcatccggtggcgctgatcggcgacttcaatgtggtgccgaccgatgcg
gatatctacgaccccaagggctggcgcaaggacgccctgctgcagccggagagccgcgag
gcctaccagaccctgctggcacagggctggaccgacagcctgctggccatccatggccac
acgccgatctatacgttctgggattactttcgtcagcactttgcgcgcgaccgtgggttg
cgcatcgatcatctgctactcaatcgcacgctggcgcccgaccttcaagatgccggcgtc
gacaagtgggtacgtgcgctggaaaaggccagcgaccatgcacccacctggatcagtgtg
cgtgtaccggatgcgcccgccgaagcagcggcggatgccacgtcggccgcgaaggtgcgc
aagccgggcacagcgaaaaaggcggccgtgcccaaggcggccgccaagaagacgcccagt
gtcatcgcgaaaagagcggccaagaagatcgctgcgaagagggccacagccgcttcggca
aaaccacacaagtcggcgaaaagaacggctgactaa
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