Xanthomonas euvesicatoria pv. vesicatoria: XCV2611
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Entry
XCV2611 CDS
T00288
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xcv03016
]
XCV2611 (rnd)
Enzymes [BR:
xcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XCV2611 (rnd)
Transfer RNA biogenesis [BR:
xcv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XCV2611 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
CAJ24288
UniProt:
Q3BSC1
LinkDB
All DBs
Position
2944366..2945457
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AA seq
363 aa
AA seq
DB search
MPHWIIHPSELTDRLQAARPSRIGLDTEFIRERTYWPQLALVQMAIGDEILLIDPLIPGM
NAALKEWLTAPDIVKVMHSASEDLVTFKCACGALPRPLFDTQIAAALAGVGGGMGYQKLV
QEVTGTLLTKGETRSDWMRRPLSPAQLEYAADDVRYLFAIHDALTRRLAEQGRLEWLAED
AERLLATVEHDDGERWPHVSLRAAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILDNE
LASQLARFPPADLEALLRQFDKFPKAPRKLANAVWDALNIPLPDEEHAPLAQAATDGNKA
VLKRLQDAVAQRSRELGLPDGLLASRRHLETLMEQRSWPAALGQWRRALLESQLMPLLDD
TAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgccccattggatcatccacccctccgagctgactgaccgcctgcaggcagcgcgaccg
tcgcgcatcggcctggatacagaattcattcgcgagcgcacctactggccgcagctggcc
ctggtgcagatggccatcggcgatgagatcctgctgatcgacccgctgatccccggcatg
aacgcggcgctcaaggagtggttgaccgcccccgacatcgtcaaggtgatgcatagcgcc
agcgaagacctggtcacgttcaaatgcgcgtgtggcgccttgccgcggccgttgttcgac
acccagatcgccgcggccctagccggtgtcggcggcggcatgggctaccagaaactggtg
caggaagtcaccggcaccttgctgaccaagggcgagacacgctcggactggatgcgtcgc
ccgctgtcgccggcgcaactggaatatgccgccgacgacgtgcgctatctgtttgcgatc
cacgacgcgctcacccgccgcctcgccgagcagggccgtctggagtggctggccgaagat
gccgagcgcctgctcgccacggtggagcacgacgatggcgagcgctggccgcatgtgagc
ctgcgtgccgcacagttcctggaaccggccgcgcaacgacgcctgctgcggctgctgcgt
tggcgcgacctgcaggcgcggcagagcgatcgcccgcgcagctggatcctggacaacgag
ctggccagccagctggcgcggtttccgcccgccgatctggaagccttgctgcgccagttc
gataaattccccaaggcgccgcgcaagcttgccaacgcggtgtgggatgcactcaacatc
ccgctgccggatgaagagcacgcgccgctggcgcaggccgccaccgacggcaacaaggcc
gtactcaaacggctgcaggacgccgtggcgcagcgtagccgcgaactcggcctgccggac
ggcctgctggcctcgcgccgccacctggaaaccctgatggaacaacgcagctggcctgcg
gcgctgggccaatggcgtcgtgccctgctggaatcacagctgatgccgctgctggacgac
actgcggcgtag
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