Xanthomonas euvesicatoria pv. vesicatoria: XCV2887
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Entry
XCV2887 CDS
T00288
Name
(GenBank) MiaB-family RNA modification enzyme
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcv03009
]
XCV2887
Enzymes [BR:
xcv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
XCV2887
Ribosome biogenesis [BR:
xcv03009
]
Prokaryotic type
ribosomal protein modification factors
XCV2887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
TRAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
CAJ24566
UniProt:
Q3BRJ5
LinkDB
All DBs
Position
complement(3282591..3283967)
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AA seq
458 aa
AA seq
DB search
MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTE
SLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTRLHYVYPYPH
VDDVIGLMAEGRLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAMCPEITVRST
FIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVDGASANALPDQVPEEVKHERLARF
MAKQAQISALRLESKIGSVQQCLVDVIEDDIAVARSRADAPEIDGLVHIQNGGELGLKVG
DLVDVEITDSDEHDLFGDALPSGPAVQQPGRTLNLQIV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccctaaagtcggcttcgtcagccttggctgcccgaaggcgctcgtc
gattccgaacgcatcctcacccagctgcgcgtggaggggtacgacatcgtgcccagctac
gacgctgccgatgtggtggtggtcaatacctgcggcttcatcgattcggcagtgaccgaa
tcgctggacgcgatcggcgaagcgatgaacgccaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgcccggagcagattcgtgaggcgtatccgcaggtgctggcagtatccggc
ccgcaggactaccagagcgtcatggaggcagtgcacgccgcgttgccgccgcgtcacgac
ccgttcgtggacctggtgccggactacggcatcaagctgaccccgcgccattacgcttac
ttgaagatttccgaaggctgcaatcaccggtgcagcttctgcatcattccctcgatgcgc
ggcgatctggtctcgcgtccggtcgatgaggtgctgcgcgaagccgagcggttggtgcgc
ggtggcgtcaaggaattgctggtggtgtcgcaggacacctcggcctatggcgtggacctg
aagtacgccgagcgtccgtggcgcgaccgcatgtaccagacccgcatgaaggcgctgtgc
gaggggttgtcggagctgggcgtgtggacgcgcctgcattacgtgtacccgtatccgcac
gtggacgatgtgattgggctgatggccgaaggcaggctgctgccgtatctggacatcccg
ttccagcacgccagcccgcgcatcctcaagttgatgaagcgcccgggcgcggtggaaaaa
accctggagcgcgtgcagcgctggaaggcgatgtgcccggagatcaccgtgcgctcgacc
ttcatcgtcggtttccccggcgaaaccgatgccgaattcgaatccttgctggacttcctg
gatcaggcgcagctggaccgcgtcggtgcgtttgcgtattcgccggtcgatggcgccagc
gccaacgcattgccggatcaggtgcccgaagaagtgaaacacgagcgcctggcgcgcttc
atggccaagcaggcgcagatctctgcgttgcgcctggaatccaagatcggcagcgtgcag
cagtgcctggtggatgtgatcgaagacgacatcgcggtggcccgctcgcgtgccgatgcg
ccggaaatcgatgggctggtgcatatccagaacggcggcgagctcggcttgaaggtgggc
gatctggtcgatgtggaaatcaccgacagcgacgagcacgatctgtttggcgatgcattg
ccgtctggccccgcggtgcagcagccagggcggacattgaacctgcagatcgtttag
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