Xanthomonas euvesicatoria pv. vesicatoria: XCV3342
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Entry
XCV3342 CDS
T00288
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcv03009
]
XCV3342 (rluD)
Enzymes [BR:
xcv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
XCV3342 (rluD)
Ribosome biogenesis [BR:
xcv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XCV3342 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAJ25073
UniProt:
Q3BQ90
LinkDB
All DBs
Position
complement(3827016..3828011)
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AA seq
331 aa
AA seq
DB search
MSDPSAEPLDPSIRQAIVPDNAAGRRFDAVLAELFPEFSRSRLSEWIKSGDALLDGEMAR
PRDTLRGGESVQLQVVLETQTHAAPQDIPLSVLYEDEQVLVIDKPAGLVVHPGAGNPDQT
LVNALLFRDPALASVPRAGVVHRLDKDTSGVMVVARTVQAQTALVEQLSAREVHRQYLAV
VVGALVSGGTVNAPIDRHPRDRLKMAVRDDGRDAVTHYRLRERFRAHTALECRLETGRTH
QIRVHMAHLKSPIVGDPLYGGALKLPKGATDELVHELRSFKRQALHAETLEFLHPVSGEP
VRASAPVPADLQRLMTVLREDSARAAELARR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacccatctgccgaacccctcgacccgtccatccgccaggcgatcgtgcccgac
aatgccgccggacgccgtttcgacgcagtgctggccgagctgttcccggagttttcgcgc
tcgcggctgtcggaatggatcaagtccggcgacgcgctgctggacggtgaaatggcgcgc
ccgcgcgataccttgcgcggcggcgagagcgtgcagctgcaggtggtgctggaaacccag
acccacgccgcgccgcaggacattccgctgagcgtgctgtacgaagacgagcaggtgctg
gtgatcgacaagccggccggcctggtggtgcatccgggcgccggcaatccggaccagacc
ctggtcaatgcgctgctgttccgcgacccggcgctggcctcggtgccgcgcgccggggtg
gtgcatcgcctggacaaggacaccagcggcgtgatggtggtggcgcgcaccgtgcaggcg
cagaccgcgctggtggagcagctgtccgcgcgcgaggtgcatcgccagtatctggccgtg
gtggtgggcgcgctggtctccggcggcaccgtcaacgccccgatcgatcgccacccgcgc
gaccgcctgaagatggcggtgcgcgacgacggccgcgatgcggtcacccattaccgcctg
cgcgagcgtttccgtgcgcacaccgcgctggagtgccggctcgaaaccgggcgtacccac
cagattcgcgtgcacatggcgcacctgaagtcgccgatcgtcggcgacccgctgtacggc
ggcgcgctcaagctgcccaagggcgctaccgacgagctggtgcacgaactgcgcagcttc
aagcgccaggcgctgcacgccgaaaccctggaattcctgcatccggtcagcggcgagccg
gtccgcgccagtgcgccggtgccggccgatctgcagcgcctgatgaccgtgctgcgcgaa
gacagcgcacgcgccgccgagctggcacgccgctga
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