Xanthomonas euvesicatoria pv. vesicatoria: XCV3632
Help
Entry
XCV3632 CDS
T00288
Name
(GenBank) putative rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XCV3632
Enzymes [BR:
xcv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
XCV3632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
Motif
Other DBs
NCBI-ProteinID:
CAJ25363
UniProt:
Q3BPF0
LinkDB
All DBs
Position
4178465..4180036
Genome browser
AA seq
523 aa
AA seq
DB search
MPCFRQLTRMPRNLRHYFACALLLYAGISAPALADFGISRSGNRVIVDSGAELVFAVDAR
NGDIVSMRYRDNELQTTESKGSHIASGLGSASVYARIVGGTIVVSAKAGDLVQYYIARKG
RNAIYMATDAPTLLPVGELRFVARLNVSKLPNAQQEPDSNVGRAIESEDVFLLPDGRTSS
KSYSARRMMDDQVHGVSGPGVAVFMLMGNRERSAGGPFFKDIATQKTSLTHELYNYMYSD
HTQTEAFRGGLHGVYGLLFTDGSLPSSAQLDTAFVDATLGLSGYLPASGRGTVSGHVGGV
LPGQPAVIGLRNAQAQYWATADGSGNYQVTGVRPGSYRMTLYQNELEVAQRNIEVSAGAT
AHAALQAVVLPGTVKWQIGIPDGTPVGFSDADLLPRAHPSDARMHWSAVTYTVGSSSVSS
FPAVQWRGINTPSRIDFTLPANEVRGYRLRLFVPLAQGGARPQISVNARWNGPLPAAPTQ
PKTRGITRGTARGNNTLYEVDIPASALQAGNNRIEIGIASLPG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgccttgcttccgacagctcacccgcatgcctcgcaatcttcgacattacttcgcctgc
gcactgctgctctatgccggcatcagcgcacctgcactggccgacttcgggatcagccgc
agcggcaaccgcgtgatcgtcgacagcggcgccgagctggtgtttgcggtcgatgcccga
aatggcgacatcgtgtcgatgcgctatcgcgacaacgaactgcagaccaccgaatcgaag
ggctcgcacatcgcttcggggttgggcagtgccagtgtgtatgcacgcatcgttggcggg
acgatcgtggtgtcggccaaggccggcgacttggtccagtactacatcgcacgcaagggc
cgcaacgcgatctacatggccaccgatgcgcccaccttgctgccagtgggcgaattgcgc
ttcgtcgcccgcttgaacgtgtccaagttgcccaatgcgcagcaggagcccgattccaat
gtcggcagagcgatcgaaagtgaggatgtctttctattgccggatgggcgcaccagctcc
aagtcctattctgcacgtcgaatgatggacgaccaggtgcatggcgtcagtggccctggc
gttgccgtgttcatgctgatgggcaaccgcgagcgcagcgcgggcggcccgttcttcaag
gacattgcgacgcaaaaaaccagcctgacgcatgagctctataactacatgtattccgat
cacacccagaccgaagcctttcgcggcggcctgcacggggtgtacgggctgctgttcacc
gatggaagcttgccgtcgagtgcgcagctggacaccgcgttcgtcgatgccacgctgggc
ctgagcggttatttgccggcaagcgggcgcggcaccgtgagtgggcacgtcggcggcgtg
ctgccgggccagccggccgtcatcggcctgcgcaacgcgcaggcgcagtactgggccacc
gccgacggcagcgggaactaccaggtgacgggtgttcgcccgggcagctatcgcatgacg
ctctaccaaaacgaactggaggtcgcacaacgcaacatcgaggtttctgccggtgccact
gcgcacgccgcactgcaggcggtcgttttgccgggcacggtgaagtggcagatcggcatt
cccgacggcacgccggtggggttcagcgacgcggacctgctgccgcgggcgcacccttcc
gatgcgcgcatgcactggtctgcggtgacctacaccgtgggatcgagcagcgtgagcagc
tttccggcagtgcagtggcgcggcatcaacaccccgagccggatcgacttcaccctgccc
gccaacgaggtgcgcggctatcgcctgcgtcttttcgtgccgttggcacagggcggcgca
cgtccgcagatcagcgtgaacgcacgctggaacggcccgctgcctgccgcgcccacgcaa
ccaaagacacgcggcatcacgcgcggcactgcgcgcggcaacaataccctttacgaagtg
gacatccctgcctcggccttgcaggccggcaacaaccgcatcgagatcggcattgcctcg
ctccccggataa
DBGET
integrated database retrieval system
