Xanthomonas euvesicatoria pv. vesicatoria: XCV3709
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Entry
XCV3709 CDS
T00288
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv00521
Streptomycin biosynthesis
xcv00523
Polyketide sugar unit biosynthesis
xcv00525
Acarbose and validamycin biosynthesis
xcv00541
Biosynthesis of various nucleotide sugars
xcv01100
Metabolic pathways
xcv01110
Biosynthesis of secondary metabolites
xcv01250
Biosynthesis of nucleotide sugars
Module
xcv_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XCV3709 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XCV3709 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
XCV3709 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XCV3709 (rmlB)
00525 Acarbose and validamycin biosynthesis
XCV3709 (rmlB)
Enzymes [BR:
xcv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
XCV3709 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
CAJ25440
UniProt:
Q3BP73
LinkDB
All DBs
Position
complement(4284693..4285748)
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AA seq
351 aa
AA seq
DB search
MTTWLVTGGAGFIGGNFVLEAVSRGVRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIG
DGALVTRLLQEHRPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLALLEAVRDYWKALPD
ASRDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLGN
GRVGQTYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRASQITHVTDRPGHDRRYAID
ASKLKNELGWEPAYTFEQGIAQTVEWYLGNQAWVQGVLDGSYRLERIGAAS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacttggcttgtaaccggcggcgccggtttcatcggcggcaattttgtgctggaa
gcggtgtcccgcggcgtccgcgtggtcaatctggacgccctgacttacgcgggaaacctg
aacacactggcgtcgttggagggcaatcctgaccatgtctttgtcaagggcgatatcggt
gacggtgcgctcgtcacccgcctgctgcaagaacaccggcccgatgcggtgctgaatttc
gctgccgagagccatgtcgatcgttcgatcgatgggcctggcgccttcatccagaccaat
gtcgtcgggaccttggccctgctcgaagcagtgcgtgattactggaaggcgttgccggat
gcgagtcgggatgcgttccgcttcctgcacgtgtccaccgacgaggtctacggcaccctg
ggcgagaccggcaagttcactgagaccacgccatatgcgccgaactcaccgtactccgcg
tcgaaagccgcctcggatcatctggtgcgcgcattccaccacacttatgggctgccggtg
ctgaccaccaattgctcgaataattacggcccatatcatttccccgaaaagctcatcccg
ctggtgatcgccaaggcgctggctggcgagccgcttccggtctacggcgacggcaagcag
gtgcgtgactggctgttcgtcagcgatcactgcgaggcgatccgtacggtgctgggcaac
ggtagggtcggccaaacctacaatgtcggtggcaattccgagcggcagaacatcgaggtc
gtgcaggccatctgcgcattgctggatcagcatcgtccgcgcgaagacggcaagccacgc
gcgagccagattacccatgtgaccgaccggcccgggcacgaccgtcgttacgcgatcgat
gcttcgaagttgaagaacgaattgggttgggagcctgcctataccttcgagcagggcatc
gcgcagacggtggagtggtatcttggtaatcaggcgtgggtacagggcgtgctggacgga
agctaccgtctggaacgtatcggcgcggcgtcctga
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