Xanthomonas euvesicatoria pv. vesicatoria: XCV3777
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Entry
XCV3777 CDS
T00288
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv00010
Glycolysis / Gluconeogenesis
xcv00020
Citrate cycle (TCA cycle)
xcv00260
Glycine, serine and threonine metabolism
xcv00280
Valine, leucine and isoleucine degradation
xcv00310
Lysine degradation
xcv00380
Tryptophan metabolism
xcv00620
Pyruvate metabolism
xcv00630
Glyoxylate and dicarboxylate metabolism
xcv00640
Propanoate metabolism
xcv00670
One carbon pool by folate
xcv00785
Lipoic acid metabolism
xcv01100
Metabolic pathways
xcv01110
Biosynthesis of secondary metabolites
xcv01120
Microbial metabolism in diverse environments
xcv01200
Carbon metabolism
xcv01210
2-Oxocarboxylic acid metabolism
xcv01240
Biosynthesis of cofactors
Module
xcv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xcv_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
xcv_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xcv_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
XCV3777 (lpdA)
00020 Citrate cycle (TCA cycle)
XCV3777 (lpdA)
00620 Pyruvate metabolism
XCV3777 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
XCV3777 (lpdA)
00640 Propanoate metabolism
XCV3777 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XCV3777 (lpdA)
00280 Valine, leucine and isoleucine degradation
XCV3777 (lpdA)
00310 Lysine degradation
XCV3777 (lpdA)
00380 Tryptophan metabolism
XCV3777 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XCV3777 (lpdA)
00670 One carbon pool by folate
XCV3777 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xcv04147
]
XCV3777 (lpdA)
Enzymes [BR:
xcv01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
XCV3777 (lpdA)
Exosome [BR:
xcv04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
XCV3777 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
GIDA
FAD_oxidored
HI0933_like
DAO
NAD_binding_8
Thi4
AlaDh_PNT_C
FAD_binding_2
MCRA
3HCDH_N
DUF478
2-Hacid_dh_C
FAD_binding_3
Amino_oxidase
GCV_H
Motif
Other DBs
NCBI-ProteinID:
CAJ25508
UniProt:
Q3BP05
LinkDB
All DBs
Position
complement(4360407..4362230)
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AA seq
607 aa
AA seq
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MAVIEIKVPDIGDYSDVPVIEVLVAVGDSVAKDQGLVTLESDKATLEVPSSAAGVVKELK
VKVGDTLSEGALVLLLETEGEAAAPAKAEPKAAPAAAAPAAAPGSKPPVTPSHRAPAEPA
APKPALASGKPADIECKMVVLGAGPGGYTAAFRAADLGLETVLIERYASLGGVCLNVGCI
PSKALLHAAAVIDEVAHAGDFGVDFGQPKIALDKLREYKEKVVGKLTGGLASMAKQRKVR
TVTGVASFVSPNELEIVGDDGKTQLLRFEHCIIAAGSQAVKLPNFPWDDKRVMDSTDALE
LHDIPKTLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQG
VEVHLKTKATDVKADKAGITVSFEAAVEGEKPGLQATTYDRVLVAVGRSPNGKKIGAEKA
GVTVTERGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVAR
VIPSVAYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEQT
HRVIGGAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITD
LYIPKKK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcattgaaatcaaggttcccgacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccgtcggcgacagcgtggccaaggaccagggcctggtaacgctggaa
tcggacaaggccacgctggaagtgccgtcctcggcggccggtgtggtcaaggaactcaag
gtcaaggtcggcgacaccctgtccgaaggcgcgctcgtgctgctgctcgaaaccgaaggc
gaggctgccgcgccggccaaggccgaacccaaggctgccccggccgctgcagcgcctgcc
gccgcaccgggcagcaagccgccggtgacgccgtcgcaccgtgccccggccgagccggcc
gcgcccaagccggcgctggccagcggcaagccggccgacatcgaatgcaagatggtggtg
ctcggcgccggccccggcggctacaccgctgccttccgcgcggccgatctgggcctggag
acggtgctgatcgagcgctacgccagcctgggcggtgtctgtctcaacgtcggctgcatc
ccgtccaaggcgctgctgcatgccgccgcggtgatcgatgaagtggcccatgccggcgac
ttcggcgtggacttcggccagcccaagatcgccctggacaagctgcgcgagtacaaggaa
aaagtggtcggcaagctcaccggcggcctggccagcatggccaagcagcgcaaggtgcgc
accgtcaccggcgtggccagcttcgtctcgcccaacgagctggaaatcgtcggcgacgac
ggcaagacccaactgctgcgctttgagcactgcatcatcgccgccggctcgcaggcggtg
aagctgcccaacttcccatgggacgacaagcgcgtgatggactccaccgacgcgctggag
ttgcacgacattcccaagaccctgctggtggtcggcggcggcatcatcggcctggaaatg
gccacggtgtacagcgcgctcggcagcaaggtcaccgtggtggagttcatggaccagctg
atgccgggcgccgacaaggacctggtcaagccgctggccgatcgcctgaaaaagcagggc
gtcgaggttcatctcaagaccaaggccaccgacgtcaaggccgacaaggccggcatcacc
gtgtccttcgaagcggctgtggaaggcgaaaagcccggcctgcaggccaccacgtacgac
cgcgtgctggttgccgtgggccgtagcccgaacggcaagaagatcggtgcggaaaaggcc
ggcgtcaccgtcaccgagcgcggcttcattccggtcgatcggcagatgcgcaccaacgtg
ccgcacatcttcgccatcggcgacatcgtcggtaacccgatgctggcgcacaaggccacc
cacgaaggcaagctggctgccgaagtggctgccggcgagaagaaggaatgggtggcgcgg
gtgatcccgtcggtggcctacaccaacccggaaatcgcctgggtcggcgtcaccgagacc
gaagccaaggccaagggcctgaaggtgggcgtggccaagttcccgtgggccgccagcggc
cgcgcgatcggcatcggccgtaccgaaggtttcaccaagttgatcttcgatgaacagacg
catcgcgtgatcggtggcgccatcgtcggcgtgcatgccggcgacctgctggctgaaatt
ggcctggcgatcgaaatgggtgccgaggccgaagacatcggccacaccatccacgcgcac
ccgaccctgagcgagtcggtcggcatggccgccgaggtctacgacggcaccatcaccgat
ctgtacattcccaagaagaagtga
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