Xanthomonas euvesicatoria pv. vesicatoria: XCV3825
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Entry
XCV3825 CDS
T00288
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Pathway
xcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XCV3825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV3825
Enzymes [BR:
xcv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XCV3825
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XCV3825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Rab3-GTPase_cat
Motif
Other DBs
NCBI-ProteinID:
CAJ25556
UniProt:
Q3BNV7
LinkDB
All DBs
Position
complement(4408787..4410223)
Genome browser
AA seq
478 aa
AA seq
DB search
MFSAEVEPPWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLALPAVVPPPRV
SADFMQLAASVLCHRDPQRHAVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDT
HKMKAFVRFRRLPGEEEDFVSWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGQ
ALAFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
ELIREAGVRVREMAERAPEPVRRRVPAAPAPLPDVVTQSLAQLRTAARDCRRCELWQPAT
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVK
HFRFEQRGKRRLHRNPERTHVQACSGWLQAERAQLRPAQIVCLGATAAQAVLGSSFRLMR
ERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRRLLDPPPPSSDQSR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgctgaggtggagccgccatggagttttgaggcatggcgcgcgttggcgcgg
gcgggctggtgcgcgcaggtggagccggacgatgtggcctggaatggcggggcgcagggc
ggcttgttgatggggcagggcctgttggcgttgccggctgtggtgccaccaccacgggtc
tctgcagatttcatgcagctggcggcctcggtgctgtgtcaccgcgacccgcaacggcat
gccgtgttgtatcgcttgctgtggcgcgttgcctctggcgaaaaagccttgctggaacgc
gccaccgatgtggatgtacaccggctacggcagtggcaaaaagcggtgcagcgcgatacg
cacaagatgaaggccttcgtgcgctttcgccgcctgcccggggaagaagaagacttcgtg
tcctggttcgagcccgagcactggatcgtggatcgcgtggcgccgttttttgcgcgccgg
tttgccggcatgcgctgggcgatcctgaccccgtaccgcagcgtgcgttgggatgggcag
gcgttggcctttggcgaaggcgcggtgcgcacccaggtcccggccgacgatgcgcaggag
acgctctggcgcacgtactacgcgcacatcttcaacccggcgcggctcaacccgaccatg
atgcggcaggaaatgccgcagaaatattggaagaacctgcccgaagccacgctgttgccg
gagctgatccgcgaagccggcgtgcgcgtgcgcgagatggccgagcgcgcgcccgagccg
gtacggcgacgggtgccggcggcgcctgcgccactgccggacgtggtcacccaaagcctg
gcccagttgcgcactgccgcacgcgattgccggcgttgcgagctgtggcaaccagcaacg
caaacagtgttcggcgaagggcccgacgatgcgtcggtgatggtgatcggcgagcagcct
ggcgatgaagaggacttgagcggtcgtccgtttgtcgggcctgccgggcgcctgttcaac
atggcattgggcgagctgggtgtggaccgagagaagttttacgtcaccaatgcggtcaag
catttccgtttcgagcagcgcggcaaacggcggctgcatcgcaatcccgagcgcacccat
gtacaggcctgtagcgggtggttgcaggccgaacgggcgcaattgcgtccggcccagatc
gtctgcctgggcgcgactgcggcgcaagcggtgttgggaagcagcttccgattgatgcgc
gagcgcgggcaatggcaacgcctggacgacggcacgccggtgttgaccacggtgcatccg
tcctgggtgttgcgccagccatcgaccgatgcgcgcgaagaagggtatcgcggatttgtc
gaagatctccgtcgattgctggatccaccgccgccgtccagcgatcagtcgagatag
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