Xanthomonas euvesicatoria pv. vesicatoria: XCV3932
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Entry
XCV3932 CDS
T00288
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xcv
Xanthomonas euvesicatoria pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcv03032
]
XCV3932 (topA)
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV3932 (topA)
Enzymes [BR:
xcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XCV3932 (topA)
DNA replication proteins [BR:
xcv03032
]
Prokaryotic type
DNA Topoisomerases
XCV3932 (topA)
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XCV3932 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CAJ25663
LinkDB
All DBs
Position
4512632..4515124
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKN
EKHVEAIARAAKSADDIFLATDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPR
AIKEAMAKPRMIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIPREYWSIDAHCRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLSEDERRLYELIWRRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDTKSSEDEDEGRKLPLMKAGDNVPLDRIVTDQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGTDPKSGKE
VSARIGRFGPMVQIGTVEDEDKPTFASLRPGQSIYSISLEDALELFKMPRLLGQDQDQDV
SVGIGRFGPFARRGSTYASLKKEDDPYTIDLARAVFLIEEKEEIARNRVIKEFDGSDIQV
LNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTGKPVRKGFGAKKATLKKNTVK
DSAPKKPAVKKTATKTAASKTAVKKAPAKKTAAKTAAKRVVKKTVSKAAG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgcgacctggtccccaag
gaaggcgcggttgatccggacaacggctttgcgatgcgttacgacctgatcgagaagaac
gagaagcacgtcgaagccattgcgcgtgccgccaagagtgccgacgacatctttctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaagag
cgcggcctgctcaaggacaagccgatgcagcgggtggtgttcaccgagatcaccccgcgc
gcgatcaaggaggcgatggcaaagccacgcatgatcgccggcgacctggtggatgcgcag
caggcgcgccgcgcgctcgattacctggtcggcttcaacctctcgccggtgctgtggcgc
aaggtgcagcgcggactgtccgctggccgcgtgcaatcgccggcgctgcgcatgatcgtc
gagcgcgaagaagagatcgaagcctttatcccgcgcgaatactggtccatcgacgcgcac
tgtcggcatccctcgcaggcgttcaatgcgcggctgatcaagctggacgggcagaagttc
gagcagttcaccgtgaccgacggcgacaccgccgaggcggcgcgcctgcgcatccagcag
gccgcgcaaggcgtgctgcatgtcaccgacgtggccagcaaggagcgtaagcgccgcccc
gccccgccgttcaccacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagttgtacgaaggcgtggcactcggcgacgaa
ggctcggtcggtctgatcagctacatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggcggaaatccgcgatgtgatcgcgcgcgatttcggcaccgcttcgctgcccgaccag
cccaacgcctacaccaccaagtccaagaacgcgcaggaagcccacgaagcggtgcgcccg
acctccgcgctgcgcacgcctgcgcaagtggcgcgcttcctgtccgaggacgagcgccgc
ctgtacgagctgatctggcgccgcgcagtggcctgccagatgattccggccacgctcaat
acggtcagcgtggacctgtcggccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtcccgggctttctggccgtgtacgaagaaggcaaggacaccaagagcagcgag
gacgaagatgagggccgcaagctgccgctgatgaaggccggcgacaacgtcccgctggac
cgcatcgtcaccgatcagcacttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtcaaggcgctggaggaatacggcatcggccgtccttccacctatgcctcgatcatccag
accctgcagttccgcaaatacgtcgagatggaaggccgcagcttccgccccaccgacgtc
ggccgcgcggtgtccaagttcctgtccgggcatttcacccgctatgtcgattacgacttc
accgccaatctggaagacgatctggatgcggtgtcgcgcggcgaagccgagtggatcccg
ttgatggagaagttctggggcccgttcaaggaattggtcgaagataagaaagactcgctg
gacaagaccgatgccggcagcgtgcgcgtgctcggcaccgacccgaaaagcggcaaggaa
gtcagcgcgcgcatcggccgcttcggcccgatggtgcagatcggcacggtcgaagacgag
gacaagcccaccttcgcgtcgctgcgtcctggccagagcatctattcgatctcgctggaa
gacgcgctggaactgttcaagatgccgcgcctgctcggccaggaccaggaccaggacgtc
agcgtgggcatcggccgtttcggcccgttcgcgcgccgcggcagcacctatgcctcgctg
aagaaggaagacgacccctacaccatcgacctggcgcgcgcggtcttcctgatcgaagag
aaggaagagatcgcacgcaaccgggtgatcaaggaattcgacggcagcgacatccaggtg
ctcaacggacgcttcggcccgtatatcagcgacggcaagctcaatggcaagatccccaag
gatcgtgagccggcgtcgttgacgttcgaagaagtgcagcagctgctggccgacaccggc
aagccggtgcgcaagggctttggcgccaagaaggccaccctgaagaagaatacggtcaag
gattcggcgccgaagaagcctgccgtcaagaagaccgcgaccaagaccgcagccagcaag
accgccgtcaagaaggcgccggccaagaagaccgctgccaaaacggccgccaagcgcgtg
gtcaagaaaaccgtgagcaaggccgcaggctga
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